Host-microbiota interactions have been implicated in diverse effects ranging from immune system development to metabolism and behavior. Recent studies implicate a pivotal role for microbial metabolites that may act on the host. In the most recent funding period of our grant, we have shown that in the simple animal host Caenorhabditis elegans, chemosensory recognition of specific virulence-associated secondary metabolites produced by Pseudomonas aeruginosa activates a G protein-dependent signaling pathway that alters the neuronal expression pattern of DAF-7, a neuronal TGF? ligand with restricted expression that has previously been shown to regulate diverse aspects of C. elegans physiology. Induction of DAF-7 expression in the ASJ sensory neuron pair acts on specific promoters to promote behavioral avoidance by C. elegans. This behavioral phenotype and quantitative analysis of DAF-7 expression changes is further complemented by calcium imaging with GCaMP of ASJ neuron activation in response to bacterial metabolites. Our data have established an experimental system in a simple, genetically tractable host with a well-defined nervous system, which we can use to define the molecular mechanisms by which microbial metabolites can influence host physiology and behavior. From the analysis of over twenty mutants that exhibit defective daf-7 transcriptional responses in the ASJ neurons in response to P. aeruginosa, we have identified distinct candidate calcium-dependent signaling pathways that regulate the host neuroendocrine response to P. aeruginosa metabolites. We have also carried out preliminary RNA-seq of ASJ neurons that have been separated and FACS-sorted, which reveal a number of candidate genes involved in the regulation of C. elegans neuronal responses to P. aeruginosa. We will conduct molecular genetic analysis to establish the signaling pathways that transduce the detection of microbial metabolites to altered DAF-7 transcription, and we will define the mechanisms by which DAF-7 expression in the ASJ neurons in regulated. We will also test the hypothesis that microbial metabolites also modulate neuroendocrine insulin signaling, and carry out a systematic functional analysis of the transcriptional responses of the ASJ neuron pair to microbial metabolites. We anticipate that defining the molecular mechanisms underlying how specific microbial metabolites can modulate the activities of conserved neuroendocrine signaling in C. elegans will yield insights into evolutionarily conserved interactions between microbiota and their animal hosts.

Public Health Relevance

This proposal aims to understand how microbial metabolites can influence the physiology and behavior of animal hosts, using the simple animal host Caenorhabditis elegans. We will conduct molecular genetic analysis of how the detection of microbial molecules alters neuronal gene expression in C. elegans, with the anticipation that our studies will reveal the mechanisms by which host-microbe interactions can modulate diverse aspects of host physiology, including behavior and aging.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM084477-13
Application #
9964840
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Zhao, Xiaoli
Project Start
2007-09-01
Project End
2021-06-30
Budget Start
2020-07-01
Budget End
2021-06-30
Support Year
13
Fiscal Year
2020
Total Cost
Indirect Cost
Name
Boston Children's Hospital
Department
Type
DUNS #
076593722
City
Boston
State
MA
Country
United States
Zip Code
02115
Tillman, Erik J; Richardson, Claire E; Cattie, Douglas J et al. (2018) Endoplasmic Reticulum Homeostasis Is Modulated by the Forkhead Transcription Factor FKH-9 During Infection of Caenorhabditis elegans. Genetics 210:1329-1337
Hilbert, Zoë A; Kim, Dennis H (2018) PDF-1 neuropeptide signaling regulates sexually dimorphic gene expression in shared sensory neurons of C. elegans. Elife 7:
Fletcher, Marissa; Kim, Dennis H (2017) Age-Dependent Neuroendocrine Signaling from Sensory Neurons Modulates the Effect of Dietary Restriction on Longevity of Caenorhabditis elegans. PLoS Genet 13:e1006544
Hilbert, Zoë A; Kim, Dennis H (2017) Sexually dimorphic control of gene expression in sensory neurons regulates decision-making behavior in C. elegans. Elife 6:
Kulalert, Warakorn; Sadeeshkumar, Harini; Zhang, Ying K et al. (2017) Molecular Determinants of the Regulation of Development and Metabolism by Neuronal eIF2? Phosphorylation in Caenorhabditis elegans. Genetics 206:251-263
Meisel, Joshua D; Kim, Dennis H (2016) Inhibition of Lithium-Sensitive Phosphatase BPNT-1 Causes Selective Neuronal Dysfunction in C. elegans. Curr Biol 26:1922-8
Cattie, Douglas J; Richardson, Claire E; Reddy, Kirthi C et al. (2016) Mutations in Nonessential eIF3k and eIF3l Genes Confer Lifespan Extension and Enhanced Resistance to ER Stress in Caenorhabditis elegans. PLoS Genet 12:e1006326
Pagano, Daniel J; Kingston, Elena R; Kim, Dennis H (2015) Tissue expression pattern of PMK-2 p38 MAPK is established by the miR-58 family in C. elegans. PLoS Genet 11:e1004997
Meisel, Joshua D; Panda, Oishika; Mahanti, Parag et al. (2014) Chemosensation of bacterial secondary metabolites modulates neuroendocrine signaling and behavior of C. elegans. Cell 159:267-80
Kulalert, Warakorn; Kim, Dennis H (2013) The unfolded protein response in a pair of sensory neurons promotes entry of C. elegans into dauer diapause. Curr Biol 23:2540-5

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