Over 40 diseases have been shown to be associated with human leukocyte (HLA) antigens of the major histocompatibility complex in humans. Theoretical studies in the development of models to determine the modes of inheritance of the HLA associated diseases have led to a better understanding of the inheritance pattern in insulin dependent diabetes mellitus, rheumatoid arthritis, multiple sclerosis, ankylosing spondylitis, hemochromatosis, celiac disease, and others. It is now clear that the HLA associated diseases may involve heterogeneity in their HLA components, as well as non-HLA genetic components.
The specific aim of our research program is to study the genetic and environmental components in the etiology of the HLA associated diseases, and population genetic features of the HLA region. Our research approach will involve the development of novel methods based on mathematical and genetic- epidemiological models to analyze population and family data, including the construction of statistical analyses that can test the various models. Our disease studies will include investigation of the extent of heterogenity and modes of inheritance of the HLA associated disease predisposing alleles, the contribution of non- HLA loci to the genetic component of the HLA associated diseases, the contribution of non-genetic components to disease expression, the role of the HLA antigens themselves in disease predisposition, the genetic interrelationship of the HLA associate ddiseases, and the analysis of restriction fragment length polymorphism (RFLP) data for the HLA associated diseases. Our population studies will continue our theoretical studies of measures of linkage disequilibrium and analysis of HLA population data, including the RFLP data. The great variety and complexity of molecular, genetic and physiological phenomena present in the expression of the genes of the HLA region make it an extraordinary resource and testing ground for examining genetic causation in disease. The results of our studies have profound public health significance, particularly in the application of screening health programs and genetic counseling, and bear considerably on new approaches relating to recombinant DNA technologies and gene therapy, differential diagnosis and epidemiological considerations.

Agency
National Institute of Health (NIH)
Institute
Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD)
Type
Research Project (R01)
Project #
5R01HD012731-12
Application #
3311997
Study Section
Mammalian Genetics Study Section (MGN)
Project Start
1979-04-01
Project End
1992-03-31
Budget Start
1990-04-01
Budget End
1991-03-31
Support Year
12
Fiscal Year
1990
Total Cost
Indirect Cost
Name
University of California Berkeley
Department
Type
Schools of Earth Sciences/Natur
DUNS #
094878337
City
Berkeley
State
CA
Country
United States
Zip Code
94704
Grote, M N; Klitz, W; Thomson, G (1998) Constrained disequilibrium values and hitchhiking in a three-locus system. Genetics 150:1295-307
Valdes, A M; McWeeney, S; Thomson, G (1997) HLA class II DR-DQ amino acids and insulin-dependent diabetes mellitus: application of the haplotype method. Am J Hum Genet 60:717-28
Valdes, A M; Thomson, G (1997) Detecting disease-predisposing variants: the haplotype method. Am J Hum Genet 60:703-16
Bui, M M; Luo, D F; She, J Y et al. (1996) Paternally transmitted IDDM2 influences diabetes susceptibility despite biallelic expression of the insulin gene in human pancreas. J Autoimmun 9:97-103
Luo, D F; Buzzetti, R; Rotter, J I et al. (1996) Confirmation of three susceptibility genes to insulin-dependent diabetes mellitus: IDDM4, IDDM5 and IDDM8. Hum Mol Genet 5:693-8
Salamon, H; Tarhio, J; Ronningen, K et al. (1996) On distinguishing unique combinations in biological sequences. J Comput Biol 3:407-23
Field, L L; Tobias, R; Thomson, G et al. (1996) Susceptibility to insulin-dependent diabetes mellitus maps to a locus (IDDM11) on human chromosome 14q24.3-q31. Genomics 33:1-8
Luo, D F; Bui, M M; Muir, A et al. (1995) Affected-sib-pair mapping of a novel susceptibility gene to insulin-dependent diabetes mellitus (IDDM8) on chromosome 6q25-q27. Am J Hum Genet 57:911-9
Thomson, G (1995) Mapping disease genes: family-based association studies. Am J Hum Genet 57:487-98
Thomson, G (1995) Analysis of complex human genetic traits: an ordered-notation method and new tests for mode of inheritance. Am J Hum Genet 57:474-86

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