The major objectives of this proposal are to elucidate the genetic mechanisms that influence fertility and mate choice in a human population isolate. The small number of independent genomes and the relatively recent origins of founder populations make them well suited for genetic studies of complex traits, such as fertility and mate choice. These studies will be conducted in the Hutterites, an inbred, reproductive isolate of European origins that is notable for its high rate of fertility. In this population increased fetal loss rates among couples matching for the 16-locus, high resolution human leukocyte antigen (HLA) haplotype (P=0.002) and for serologically-defined HLA-B antigens (P = 0.019) have been noted, suggesting that an HLA-B-linked locus may be primarily associated with fetal loss. In addition, Hutterite mate choice is nonrandom with respect to the HLA haplotype, with fewer spouses than expected matching for the 16-locus, high resolution haplotype (P less than 0.001) and a deficiency of homozygotes for the haplotype in the population (P less than 0.030).
The specific aims of the proposed investigation are: 1) to identify the HLA-B-linked locus that is primarily associated with increased fetal loss rates in this population, by determining high resolution genotypes (i.e., DNA- based typing) for alleles at the HLA-A, HLA-B, and MICA loci; 2) to further evaluate the effects of Hutterite population structure on expectations of HLA haplotype matching between spouses and homozygosity levels in the population, by studying """"""""neutral"""""""" haplotypes composed of alleles at microsatellite loci in 20 non-MHC-linked regions of the genome; and 3) to study the HLA-linked polymorphisms and expression patterns of olfactory receptor genes on chromosome 6 and determine whether polymorphism at influence mate choice in the population. Identifying genes that influence fertility and mate choice in the Hutterites may reveal novel genes and pathways through which these traits are regulated in outbred couples and perhaps lead to novel therapies for miscarriage and infertility and a better understanding of individual recognition and chemosensory signaling in humans.

Agency
National Institute of Health (NIH)
Institute
Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD)
Type
Research Project (R01)
Project #
5R01HD021244-14
Application #
6138756
Study Section
Human Embryology and Development Subcommittee 1 (HED)
Program Officer
Taymans, Susan
Project Start
1988-10-01
Project End
2002-12-31
Budget Start
2000-01-01
Budget End
2000-12-31
Support Year
14
Fiscal Year
2000
Total Cost
$202,821
Indirect Cost
Name
University of Chicago
Department
Genetics
Type
Schools of Medicine
DUNS #
225410919
City
Chicago
State
IL
Country
United States
Zip Code
60637
Sengupta, Subhajit; Gulukota, Kamalakar; Zhu, Yitan et al. (2016) Ultra-fast local-haplotype variant calling using paired-end DNA-sequencing data reveals somatic mosaicism in tumor and normal blood samples. Nucleic Acids Res 44:e25
Burrows, Courtney K; Kosova, Gülüm; Herman, Catherine et al. (2016) Expression Quantitative Trait Locus Mapping Studies in Mid-secretory Phase Endometrial Cells Identifies HLA-F and TAP2 as Fecundability-Associated Genes. PLoS Genet 12:e1005858
Livne, Oren E; Han, Lide; Alkorta-Aranburu, Gorka et al. (2015) PRIMAL: Fast and accurate pedigree-based imputation from sequence data in a founder population. PLoS Comput Biol 11:e1004139
Gao, Ziyue; Waggoner, Darrel; Stephens, Matthew et al. (2015) An estimate of the average number of recessive lethal mutations carried by humans. Genetics 199:1243-54
Kosova, Gülüm; Stephenson, Mary D; Lynch, Vincent J et al. (2015) Evolutionary forward genomics reveals novel insights into the genes and pathways dysregulated in recurrent early pregnancy loss. Hum Reprod 30:519-29
Campbell, Catarina D; Mohajeri, Kiana; Malig, Maika et al. (2014) Whole-genome sequencing of individuals from a founder population identifies candidate genes for asthma. PLoS One 9:e104396
Kosova, Gülüm; Hotaling, James M; Ohlander, Samuel et al. (2014) Variants in DPF3 and DSCAML1 are associated with sperm morphology. J Assist Reprod Genet 31:131-7
Anderson, Rebecca L; Murray, Kathleen; Chong, Jessica X et al. (2014) Disclosure of genetic research results to members of a founder population. J Genet Couns 23:984-91
Bögershausen, Nina; Shahrzad, Nassim; Chong, Jessica X et al. (2013) Recessive TRAPPC11 mutations cause a disease spectrum of limb girdle muscular dystrophy and myopathy with movement disorder and intellectual disability. Am J Hum Genet 93:181-90
Gerull, Brenda; Kirchner, Florian; Chong, Jessica X et al. (2013) Homozygous founder mutation in desmocollin-2 (DSC2) causes arrhythmogenic cardiomyopathy in the Hutterite population. Circ Cardiovasc Genet 6:327-36

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