Investigators' Abstract): The goals of the Human Genome Initiative include high resolution genetic and physical mapping of several species in addition to man. Genetic analysis of the mouse is especially important because the mouse can provide a model system for studies of many human genetic diseases. The availability in inbred mouse strains enhances the utility of the mouse for genetic studies and permits rapid construction of recombinational maps that predict gene order with a much higher degree of certainty than do maps of outbred species. A number of human genes including some involved in major human genetic diseases have been identified and localized based on their positions in the mouse genome. The specific goals of this project are to prepare high resolution recombinational and physical maps of mouse chromosome 16 and additional mouse chromosomes with homology to human chromosome 21. The recombinational maps will be constructed using an """"""""interval mapping"""""""" procedure, which requires 99% less effort than conventional mapping. The tools for this application include over 1,000 backcross DNAs from six previously constructed crosses between different subspecies of Mus. These crosses display a high level of polymorphism at the DNA level to simplify the search for polymorphism. Recombinational maps will provide the basis for physical maps of the chromosome made with """"""""radiation hybrids,"""""""" pulsed-field gel electrophoresis, and yeast artificial chromosomes. A maximal number of human probes will be utilized to emphasize the comparative value of the map. Recently developed methods which permit identification of genes on very large DNA segments cloned as YACs will be utilized to provide a profile of the distribution of transcribed segments on the chromosome. The comparative maps of mouse chromosome 16 and human chromosome 21 may provide insights into genes which play a critical role in the developmental anomalies that occur in Down syndrome.

Agency
National Institute of Health (NIH)
Institute
National Human Genome Research Institute (NHGRI)
Type
Research Project (R01)
Project #
1R01HG000405-01
Application #
3333587
Study Section
Genome Study Section (GNM)
Project Start
1991-04-01
Project End
1994-03-31
Budget Start
1991-04-01
Budget End
1992-03-31
Support Year
1
Fiscal Year
1991
Total Cost
Indirect Cost
Name
Johns Hopkins University
Department
Type
Schools of Medicine
DUNS #
045911138
City
Baltimore
State
MD
Country
United States
Zip Code
21218
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Wiltshire, T; Pletcher, M; Cole, S E et al. (1999) Perfect conserved linkage across the entire mouse chromosome 10 region homologous to human chromosome 21. Genome Res 9:1214-22
Reeves, R H; Cabin, D E (1999) Mouse chromosome 16. Mamm Genome 10:957
Cole, S E; Wiltshire, T; Rue, E E et al. (1999) High-resolution comparative physical mapping of mouse chromosome 10 in the region of homology with human chromosome 21. Mamm Genome 10:229-34
Moore, C S; Lee, J S; Birren, B et al. (1999) Integration of cytogenetic with recombinational and physical maps of mouse chromosome 16. Genomics 59:1-5
Cole, S E; Reeves, R H (1998) A cluster of keratin-associated proteins on mouse chromosome 10 in the region of conserved linkage with human chromosome 21. Genomics 54:437-42
Cabin, D E; McKee-Johnson, J W; Matesic, L E et al. (1998) Physical and comparative mapping of distal mouse chromosome 16. 5 p5. Genome Res 8:940-50
Murakami, Y; Nobukuni, T; Tamura, K et al. (1998) Localization of tumor suppressor activity important in nonsmall cell lung carcinoma on chromosome 11q. Proc Natl Acad Sci U S A 95:8153-8
Borriello, F; Tizard, R; Rue, E et al. (1998) Characterization and localization of Mox2, the gene encoding the murine homolog of the rat MRC OX-2 membrane glycoprotein. Mamm Genome 9:114-8
Cole, S E; Wiltshire, T; Reeves, R H (1998) Physical mapping of the evolutionary boundary between human chromosomes 21 and 22 on mouse chromosome 10. Genomics 50:109-11

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