The goal of the Human Genome Project is to complete the genome sequence of humans and several model systems. To achieve this goal, order-of- magnitude advances must be made in the development and application of several key technologies. Low cost, high speed DNA sequencing and genotyping is one of these technologies. In the two and one half years of our current program on microfabricated DNA electrophoresis chips, we have succeeded in rapidly developing and routinely operating sequencing devices. Our microchip devices have proved the technology works and we have set the standards for performance of this class of devices. Based on our results and our multidisciplinary expertise, we propose a three year program to build and test 384-lane microfabricated DNA analysis systems under realistic genome center conditions. The systems should provide at least an order of magnitude increase in sequence production with corresponding decreases in overall sequencing costs.

Agency
National Institute of Health (NIH)
Institute
National Human Genome Research Institute (NHGRI)
Type
Research Project (R01)
Project #
5R01HG001389-06
Application #
6138891
Study Section
Special Emphasis Panel (ZHG1-HGR-N (O2))
Program Officer
Schloss, Jeffery
Project Start
1995-09-30
Project End
2002-02-28
Budget Start
2000-05-01
Budget End
2001-02-28
Support Year
6
Fiscal Year
2000
Total Cost
$1,772,620
Indirect Cost
Name
Whitehead Institute for Biomedical Research
Department
Type
DUNS #
076580745
City
Cambridge
State
MA
Country
United States
Zip Code
02142
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Cheung, Man C; Evans, James G; McKenna, Brian et al. (2011) Deep ultraviolet mapping of intracellular protein and nucleic acid in femtograms per pixel. Cytometry A 79:920-32
Ueberfeld, Joern; Ehrlich, Daniel J (2009) Scaling of nucleic acid assays on microelectrophoresis array devices: high-dynamic range multi-gene readout from less than ten transcripts. Electrophoresis 30:2090-9