One major component of our program aimed toward establishing the mechanisms of function of biological metal centers is to explore and expand the contributions that electron nuclear double resonance (endor) spectroscopy can make to metallobiochemistry. To this end we shall develop and apply advanced methodologies, including the use of loop-gap resonators, multi-frequency endor, double endor, and pulsed endor. Using the technique not merely to examine protein resting states, but to probe chemically reactive enzymic intermediates, it will be applied to single site and binuclear copper and iron proteins, peroxidase enzymic intermediates, and complex enzymes, such as cytochrome c oxidase and sulfate reductase, that catalyze the multi-electron reductions of small molecule substrates. The other component is the study of the mechanism of function of hemoproteins, in particular the cooperative binding of ligands to hemoglobin, but also reactive enzymic intermediates of horseradish and cytochrome c peroxidases, and cytochrome P450. Through the use of metal-substituted proteins, employing cobalt, manganese, zinc, and other metalloporphyrins as well, we are able to modify the physical and chemical properties of a protein in significant and interpretable ways, and to introduce new physical and spectroscopic probes with which to observe the influence of a protein environment on a prosthetic group. These metal-substituted proteins, in particular mixed-metal hybrid hemoglobins, also offer unique opportunites in diverse new studies. They will allow direct measurement of long-range (25 Angstroms) electron tunnelling between protein-bound chromosphores that are rigidly held at fixed and crystallographically known distances and orientations. In addition, they will serve as the basis for a new method for examining the gelation of sickle-hemoglobin, and will allow us to characterize the state of free protoporphyrin and zinc protoporphyrin in red blood cells from patients with erythropoietic and iron deficiency anemias, and chronic lead intoxication.

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Project (R01)
Project #
5R01HL013531-13
Application #
3334654
Study Section
Metallobiochemistry Study Section (BMT)
Project Start
1979-01-01
Project End
1988-12-31
Budget Start
1985-01-01
Budget End
1985-12-31
Support Year
13
Fiscal Year
1985
Total Cost
Indirect Cost
Name
Northwestern University at Chicago
Department
Type
Schools of Arts and Sciences
DUNS #
City
Evanston
State
IL
Country
United States
Zip Code
60208
Davydov, Roman; Im, Sangchoul; Shanmugam, Muralidharan et al. (2016) Role of the Proximal Cysteine Hydrogen Bonding Interaction in Cytochrome P450 2B4 Studied by Cryoreduction, Electron Paramagnetic Resonance, and Electron-Nuclear Double Resonance Spectroscopy. Biochemistry 55:869-83
Shen, Jingmei; Kung, Mayfair C; Shen, Zhongliang et al. (2014) Generating and stabilizing Co(I) in a nanocage environment. J Am Chem Soc 136:5185-8
Davydov, Roman; Labby, Kristin Jansen; Chobot, Sarah E et al. (2014) Enzymatic and cryoreduction EPR studies of the hydroxylation of methylated N(?)-hydroxy-L-arginine analogues by nitric oxide synthase from Geobacillus stearothermophilus. Biochemistry 53:6511-9
Ortony, Julia H; Newcomb, Christina J; Matson, John B et al. (2014) Internal dynamics of a supramolecular nanofibre. Nat Mater 13:812-6
Hoffman, Brian M; Lukoyanov, Dmitriy; Yang, Zhi-Yong et al. (2014) Mechanism of nitrogen fixation by nitrogenase: the next stage. Chem Rev 114:4041-62
Lukoyanov, Dmitriy; Yang, Zhi-Yong; Duval, Simon et al. (2014) A confirmation of the quench-cryoannealing relaxation protocol for identifying reduction states of freeze-trapped nitrogenase intermediates. Inorg Chem 53:3688-93
Hoffman, Brian M; Lukoyanov, Dmitriy; Dean, Dennis R et al. (2013) Nitrogenase: a draft mechanism. Acc Chem Res 46:587-95
Sharma, Ajay; Gaidamakova, Elena K; Matrosova, Vera Y et al. (2013) Responses of Mn2+ speciation in Deinococcus radiodurans and Escherichia coli to ?-radiation by advanced paramagnetic resonance methods. Proc Natl Acad Sci U S A 110:5945-50
Davydov, Roman; Dawson, John H; Perera, Roshan et al. (2013) The use of deuterated camphor as a substrate in (1)H ENDOR studies of hydroxylation by cryoreduced oxy P450cam provides new evidence of the involvement of compound I. Biochemistry 52:667-71
Yang, Zhi-Yong; Khadka, Nimesh; Lukoyanov, Dmitriy et al. (2013) On reversible H2 loss upon N2 binding to FeMo-cofactor of nitrogenase. Proc Natl Acad Sci U S A 110:16327-32

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