Our long-term goal is to develop for the safe, effective treatment of sickle cell anemia. Our approach involves the rational design and selection, synthesis and testing of stereospecific inhibitors of sickle cell hemoglogin (HbS) polymerization (gelling). To do this, we follow an iterative, cyclic process which involves: (1) using structural information and basic chemical principles to (re-)design compounds to bind to specific sites on Hb, or to select such compounds from among FDA-approved drugs used for other purposes; (2) syntehsizing designed or selected compounds and analogs of these compounds; (3) testing the synthetic compounds for antigelllng activity and effect on oxygen equilibrium; (4) performing X-ray crystallographic studies of the compounds bound to Hb to obtain structural information on binding sites, binding site environments and binding characteristics for use in the next iteration of the cycle. Red cell permetion, rheological, toxicological and in vivo distribution studies are done on the most active compounds. The proposed work builds upon and will extend our past successes achieved through oru use of this process.
Its specific aims are to: (1) determine the covalent bindings site of ethacrynic acid on Hb; (2) test ethacrynic acid analogs which do not have a diuretic effect; (3) synthesize analogs of highly active compounds in our phenoxy and benzyloxy series to improve binding affinity; (4) determine the binding sites on Hb of active meta disubstituted benzoic acid derivatives; (5) determine the physiological effects of binding of various compounds at various sites on Hb; (6) test compounds developed or selected for antigelling activity and oxygen equlibrium effects, and perform red cell permeation, solution binding, rheological and toxicological studies of the most active compounds. In vivo distribution studies of radio-labeled analogs of the most active compounds will be done by colleagues at no cost to the project. Results of this work should greatly further progress toward our ultimate goal of developing drugs for the safe, effective treatment of sickle cell anemia.

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Project (R01)
Project #
5R01HL032793-02
Application #
3344256
Study Section
Bio-Organic and Natural Products Chemistry Study Section (BNP)
Project Start
1984-06-01
Project End
1987-05-31
Budget Start
1985-06-01
Budget End
1986-05-31
Support Year
2
Fiscal Year
1985
Total Cost
Indirect Cost
Name
University of Pittsburgh
Department
Type
Schools of Pharmacy
DUNS #
053785812
City
Pittsburgh
State
PA
Country
United States
Zip Code
15213
Safo, M K; Abraham, D J (2005) The enigma of the liganded hemoglobin end state: a novel quaternary structure of human carbonmonoxy hemoglobin. Biochemistry 44:8347-59
Kellogg, Glen E; Fornabaio, Micaela; Spyrakis, Francesca et al. (2004) Getting it right: modeling of pH, solvent and ""nearly"" everything else in virtual screening of biological targets. J Mol Graph Model 22:479-86
Fornabaio, Micaela; Spyrakis, Francesca; Mozzarelli, Andrea et al. (2004) Simple, intuitive calculations of free energy of binding for protein-ligand complexes. 3. The free energy contribution of structural water molecules in HIV-1 protease complexes. J Med Chem 47:4507-16
Fornabaio, Micaela; Cozzini, Pietro; Mozzarelli, Andrea et al. (2003) Simple, intuitive calculations of free energy of binding for protein-ligand complexes. 2. Computational titration and pH effects in molecular models of neuraminidase-inhibitor complexes. J Med Chem 46:4487-500
Safo, Martin K; Burnett, James C; Musayev, Faik N et al. (2002) Structure of human carbonmonoxyhemoglobin at 2.16 A: a snapshot of the allosteric transition. Acta Crystallogr D Biol Crystallogr 58:2031-7
Cozzini, Pietro; Fornabaio, Micaela; Marabotti, Anna et al. (2002) Simple, intuitive calculations of free energy of binding for protein-ligand complexes. 1. Models without explicit constrained water. J Med Chem 45:2469-83
Safo, Martin K; Boyiri, Telih; Burnett, James C et al. (2002) X-ray crystallographic analyses of symmetrical allosteric effectors of hemoglobin: compounds designed to link primary and secondary binding sites. Acta Crystallogr D Biol Crystallogr 58:634-44
Youssef, Amal Mamdouh; Safo, Martin K; Danso-Danquah, Richmond et al. (2002) Synthesis and X-ray studies of chiral allosteric modifiers of hemoglobin. J Med Chem 45:1184-95
Safo, M K; Musayev, F N; Wu, S H et al. (2001) Structure of tetragonal crystals of human erythrocyte catalase. Acta Crystallogr D Biol Crystallogr 57:1-7
Kellogg, G E; Burnett, J C; Abraham, D J (2001) Very empirical treatment of solvation and entropy: a force field derived from log Po/w. J Comput Aided Mol Des 15:381-93

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