Billions of dollars are spent annually on randomized clinical trials (RCTS), yet their results are often difficult to find, interpret, and apply to clinical care. Clinicians and policy makers are therefore turning increasingly to systematic reviews for comprehensive summaries and interpretations of RCT evidence. However, problems with the accuracy, completeness, and standardiza- tion of trial reports continue to hinder the work of systematic reviewers. Consequently, the application of RCT evidence to clinical care remains inefficient and ineffective. To improve this situation, we propose that journals publish RCTs not just as text articles, but also as entries into standardized knowledge bases (trial banks) that contain all the trial information necessary for methodologically rigorous reviews of RCTs. With trial-bank publishing, the complete details of the design, execution, and results of a trial will be available for computer- based reasoning immediately upon that trial's publication. Our long-term objective is to catalyze the worldwide publication of RCTs into openly accessible trial banks that are specifically designed to support the computer- assisted application of RCTs to clinical care. JAMA and the Annals of internal Medicine (Annals) have agreed to experiment with trial-bank publishing.
Specific Aim 1 is to build a tool for entering trials into trial banks using UMLS master terms and according to trial-bank reporting guidelines.
Specific Aim 2 is to publish approximately 60 RCTs as both web-accessible trial-bank entries and as text reports in JAMA or the Annals . We will recruit clinicians and systematic reviewers to read the articles, view the trial-bank entries on the web, and comment on how their information needs were met.
In Specific Aim 3, researchers from the UCSF- Stanford Evidence-Based Practice Center will enter the RCTs that they are reviewing into trial banks, and researchers from the VA Cooperative Studies Program will use trial banks to manage their RCT protocols. We will survey these researchers to evaluate our trial-bank design for its support of systematic reviewing and trial registration. Based on the work in Aims 1-3, we will define an open trial-bank application programming interface and test its' ability to interface two RCT reasoning systems to our trial banks (Specific Aim 4). If we meet our aims, we will have shown that trial-bank publishing is feasible, and that trial banks are useful. We will also have laid the groundwork for a critical informatics infrastructure that will help us to improve the management, dissemination, and use of valuable RCT information.

Agency
National Institute of Health (NIH)
Institute
National Library of Medicine (NLM)
Type
Research Project (R01)
Project #
1R01LM006780-01
Application #
2807440
Study Section
Biomedical Library and Informatics Review Committee (BLR)
Program Officer
Sim, Hua-Chuan
Project Start
1999-07-01
Project End
2003-06-30
Budget Start
1999-07-01
Budget End
2000-06-30
Support Year
1
Fiscal Year
1999
Total Cost
Indirect Cost
Name
University of California San Francisco
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
073133571
City
San Francisco
State
CA
Country
United States
Zip Code
94143
Sim, Ida; Tu, Samson W; Carini, Simona et al. (2014) The Ontology of Clinical Research (OCRe): an informatics foundation for the science of clinical research. J Biomed Inform 52:78-91
Tu, Samson W; Peleg, Mor; Carini, Simona et al. (2011) A practical method for transforming free-text eligibility criteria into computable criteria. J Biomed Inform 44:239-50
Sim, Ida; Carini, Simona; Tu, Samson et al. (2010) The human studies database project: federating human studies design data using the ontology of clinical research. AMIA Jt Summits Transl Sci Proc 2010:51-5
Ross, Jessica; Tu, Samson; Carini, Simona et al. (2010) Analysis of eligibility criteria complexity in clinical trials. AMIA Jt Summits Transl Sci Proc 2010:46-50
Kiritchenko, Svetlana; de Bruijn, Berry; Carini, Simona et al. (2010) ExaCT: automatic extraction of clinical trial characteristics from journal publications. BMC Med Inform Decis Mak 10:56
de Bruijn, Berry; Carini, Simona; Kiritchenko, Svetlana et al. (2008) Automated information extraction of key trial design elements from clinical trial publications. AMIA Annu Symp Proc :141-5
Lee, Kirby; Bacchetti, Peter; Sim, Ida (2008) Publication of clinical trials supporting successful new drug applications: a literature analysis. PLoS Med 5:e191
Berlin, Amy; Sorani, Marco; Sim, Ida (2006) A taxonomic description of computer-based clinical decision support systems. J Biomed Inform 39:656-67
Sim, Ida; Olasov, Ben; Carini, Simona (2004) An ontology of randomized controlled trials for evidence-based practice: content specification and evaluation using the competency decomposition method. J Biomed Inform 37:108-19
Sim, Ida; Carini, Simona; Olasov, Ben et al. (2004) Trial bank publishing: phase I results. Medinfo 11:1476-80

Showing the most recent 10 out of 15 publications