In recent years, psychiatric genetics has eagerly appropriated the techniques of mathematical and statistical analysis. But methods are not static, and understanding of their strengths and weaknesses keeps evolving. Investigators are wrestling with issues of robustness, power, and appropriateness of new complex analysis methods. The human gene map is here, and scientists working in psychiatric genetics are ready to use the map, but it is not always clear how best to take advantage of this new information. Past work supported by this grant has not only developed new methods for genetic analysis but has tested and characterized those methods in rigorous theoretical analyses, supplemented by realistic computer simulations. The research focuses on linkage and segregation analysis, two of the major tools available for understanding complex diseases. Problems and complications will be quantified, and new methods to solve these problems will be developed. Results from this project will assist the genetic analysis of common psychiatric diseases with genetic components, such as autism, bipolar affective disorder, schizophrenia, Alzheimer's disease, and panic disorder.Greater understanding of the genetic contributions to psychiatric disease will lead, in turn, to improved counseling, treatment, and prevention. Research will proceed in four areas: I. Power and robustness of parametric and nonparametric linkage methods: Rigorously compare competing methods in this controversial area. II. Sex differences and linkage analysis: Quantify effects of sex differences in recombination fraction and/or in penetrance on a linkage analysis, as well as how imprinting will influence a linkage analysis. 111. Ascertainment: Develop and test good approximations for intractable ascertainment problems, particularly in the context of sequential sampling. IV. Anticipation: Develop and test accurate statistical methods for circumventing ascertainment and other biases. The project will not be restricted to the problems detailed above but is designed to be flexible and move rapidly to address new problems of pressing importance as they arise during the grant period.

Agency
National Institute of Health (NIH)
Institute
National Institute of Mental Health (NIMH)
Type
Research Project (R01)
Project #
2R01MH048858-06
Application #
2403831
Study Section
Epidemiology and Genetics Review Committee (EPI)
Project Start
1992-05-01
Project End
2002-04-30
Budget Start
1997-07-01
Budget End
1998-04-30
Support Year
6
Fiscal Year
1997
Total Cost
Indirect Cost
Name
Columbia University (N.Y.)
Department
Psychiatry
Type
Schools of Medicine
DUNS #
167204994
City
New York
State
NY
Country
United States
Zip Code
10032
Lipner, Ettie M; Tomer, Yaron; Noble, Janelle A et al. (2015) Linkage Analysis of Genomic Regions Contributing to the Expression of Type 1 Diabetes Microvascular Complications and Interaction with HLA. J Diabetes Res 2015:694107
Corso, Barbara; Greenberg, David A (2014) Using linkage analysis to detect gene-gene interaction by stratifying family data on known disease, or disease-associated, alleles. PLoS One 9:e93398
Hodges, Laura M; Fyer, Abby J; Weissman, Myrna M et al. (2014) Evidence for linkage and association of GABRB3 and GABRA5 to panic disorder. Neuropsychopharmacology 39:2423-31
Helbig, Ingo; Hodge, Susan E; Ottman, Ruth (2013) Familial cosegregation of rare genetic variants with disease in complex disorders. Eur J Hum Genet 21:444-50
Tomer, Yaron; Hasham, Alia; Davies, Terry F et al. (2013) Fine mapping of loci linked to autoimmune thyroid disease identifies novel susceptibility genes. J Clin Endocrinol Metab 98:E144-52
Lipner, E M; Tomer, Y; Noble, J A et al. (2013) HLA class I and II alleles are associated with microvascular complications of type 1 diabetes. Hum Immunol 74:538-44
Fyer, Abby J; Costa, Ramiro; Haghighi, Fatemeh et al. (2012) Linkage analysis of alternative anxiety phenotypes in multiply affected panic disorder families. Psychiatr Genet 22:123-9
Subaran, Ryan L; Talati, Ardesheer; Hamilton, Steven P et al. (2012) A survey of putative anxiety-associated genes in panic disorder patients with and without bladder symptoms. Psychiatr Genet 22:271-8
Shah, S H; Crosslin, D R; Haynes, C S et al. (2012) Branched-chain amino acid levels are associated with improvement in insulin resistance with weight loss. Diabetologia 55:321-30
Stewart, William C L; Subaran, Ryan L (2012) Obtaining accurate p values from a dense SNP linkage scan. Hum Hered 74:12-6

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