The long-term objective of this application is to determine how fructose 1,6-bisphosphatase (FBPase), a key regulatory enzyme in gluconeogenesis, functions as a catalyst and is controlled at the molecular level. Experiments are to be conducted with the enzyme from mammalian brain and liver tissue. Although brain is not a gluconeogenic tissue, it does contain FBPase. Because the substrate for this enzyme is the product of a key step in brain glycolysis involving the enzyme phosphofructokinase, coordinated regulation of these two enzymes is essential to brain tissue viability. Brain FBPase is somewhat unique among mammalian FBPases for two reasons: it does not require exogenous metal ion for activity, and it is not inhibited by AMP. One of the aims of this application is to investigate the regulation of the brain enzyme as well as its mechanism of action. The role of exogenous metal ion in FBPase enzymology is not clearly understood. Attempts will be made to evaluate the role of exogenous metal in catalysis and regulation from kinetic experiments in the nonphysiological direction in the presence and absence of AMP. Liver FBPase has two or three tightly associated metal ions per monomeric subunit. The enzyme itself is a tetramer. The function of these metals will be investigated using a variety of techniques, including nuclear magnetic resonance spectroscopy. The metals may facilitate catalysis by binding to the oxygen atoms at the 1-phosphate position of the substrate, thereby aiding nucleophilic attack by a hydroxyl ion on the phosphorous atom. On the other hand, they may simply tether the substrate to the enzyme by hydrogen bonding a liganded water molecule to the substrate, or they may merely provide the enzyme with the proper conformation for catalysis. Answers to these questions may be provided by replacing the natural metal Zn2+, with the paramagnetic ion Mn2+. By taking advantage of the fact that paramagnetic ions can effectively relax diamagnetic nuclei, and that this effect is distance dependent, it is possible to measure the distance from the metal binding site to a particular nucleus, such as the 1-P of the substrate. A knowledge of these distances may provide insights into the role of the metals in catalysis. It is also possible using this technique to obtain information on how physiologically important regulators, such as AMP and fructose 2,6-bisphosphatate, function at the molecular level to inhibit FBPase.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
Research Project (R01)
Project #
2R01NS010546-21
Application #
3394259
Study Section
Physiological Chemistry Study Section (PC)
Project Start
1975-09-01
Project End
1991-08-31
Budget Start
1986-09-01
Budget End
1987-08-31
Support Year
21
Fiscal Year
1986
Total Cost
Indirect Cost
Name
Iowa State University
Department
Type
Earth Sciences/Resources
DUNS #
City
Ames
State
IA
Country
United States
Zip Code
50011
Gao, Yang; Shen, Lu; Honzatko, Richard B (2014) Central cavity of fructose-1,6-bisphosphatase and the evolution of AMP/fructose 2,6-bisphosphate synergism in eukaryotic organisms. J Biol Chem 289:8450-61
Gao, Yang; Iancu, Cristina V; Mukind, Susmith et al. (2013) Mechanism of displacement of a catalytically essential loop from the active site of mammalian fructose-1,6-bisphosphatase. Biochemistry 52:5206-16
Zhou, Ke; Gao, Yang; Hoy, Julie A et al. (2012) Insights into diterpene cyclization from structure of bifunctional abietadiene synthase from Abies grandis. J Biol Chem 287:6840-50
Joseph, Raji E; Ginder, Nathaniel D; Hoy, Julie A et al. (2012) Structure of the interleukin-2 tyrosine kinase Src homology 2 domain; comparison between X-ray and NMR-derived structures. Acta Crystallogr Sect F Struct Biol Cryst Commun 68:145-53
Gao, Yang; Honzatko, Richard B; Peters, Reuben J (2012) Terpenoid synthase structures: a so far incomplete view of complex catalysis. Nat Prod Rep 29:1153-75
Joseph, Raji E; Ginder, Nathaniel D; Hoy, Julie A et al. (2011) Purification, crystallization and preliminary crystallographic analysis of the SH2 domain of IL-2-inducible T-cell kinase. Acta Crystallogr Sect F Struct Biol Cryst Commun 67:269-73
Warner, Christopher D; Hoy, Julie A; Shilling, Taran C et al. (2010) Tertiary structure and characterization of a glycoside hydrolase family 44 endoglucanase from Clostridium acetobutylicum. Appl Environ Microbiol 76:338-46
Leung, Daisy W; Borek, Dominika; Farahbakhsh, Mina et al. (2010) Crystallization and preliminary X-ray analysis of Ebola VP35 interferon inhibitory domain mutant proteins. Acta Crystallogr Sect F Struct Biol Cryst Commun 66:689-92
Leung, Daisy W; Prins, Kathleen C; Borek, Dominika M et al. (2010) Structural basis for dsRNA recognition and interferon antagonism by Ebola VP35. Nat Struct Mol Biol 17:165-72
Leung, Daisy W; Ginder, Nathaniel D; Fulton, D Bruce et al. (2009) Structure of the Ebola VP35 interferon inhibitory domain. Proc Natl Acad Sci U S A 106:411-6

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