Intracellular RNA trafficking provides a mechanism to target gene expression to particular sub-cellular regions and to minimize ectopic expression elsewhere in the cell. Previous work has shown that eucaryotic RNAs are assembled into trafficking intermediates termed """"""""granules."""""""" The direction and velocity of RNA granule trafficking is determined by cis-acting sequences in the RNA, trans-acting factors that bind to the RNA, and molecular motors (kinesin and dynein) that move RNA granules along microtubules. The central hypothesis of this proposal is that RNA trafficking is controlled by the balance of power between the opposing molecular motors kinesin and dynein in each granule. We will investigate 1) the mechanism of RNA granule assembly, 2) the movement of RNA granules along microtubules, 3) the regulation of kinesin and dynein activities by cis/trans trafficking determinants and 4) the steering of RNA trafficking in oligodendrocytes. The results will have significance for understanding the pathogenesis of demyelinating diseases such as multiple sclerosis that affect oligodendrocytes, the cellular and molecular mechanisms of learning and memory and synaptic plasticity in neurons, the control mechanisms for viral replication in HIV infected cells, and the molecular basis for some of the 82 different human diseases that involve intracellular trafficking.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
Research Project (R01)
Project #
5R01NS015190-24
Application #
6621797
Study Section
Special Emphasis Panel (ZRG1-MDCN-1 (01))
Program Officer
Utz, Ursula
Project Start
1979-04-01
Project End
2006-11-30
Budget Start
2002-12-01
Budget End
2003-11-30
Support Year
24
Fiscal Year
2003
Total Cost
$275,500
Indirect Cost
Name
University of Connecticut
Department
Biochemistry
Type
Schools of Medicine
DUNS #
022254226
City
Farmington
State
CT
Country
United States
Zip Code
06030
Falkenberg, Cibele Vieira; Carson, John H; Blinov, Michael L (2017) Multivalent Molecules as Modulators of RNA Granule Size and Composition. Biophys J 113:235-245
Giampetruzzi, Anthony; Carson, John H; Barbarese, Elisa (2013) FMRP and myelin protein expression in oligodendrocytes. Mol Cell Neurosci 56:333-41
Tatavarty, Vedakumar; Ifrim, Marius F; Levin, Mikhail et al. (2012) Single-molecule imaging of translational output from individual RNA granules in neurons. Mol Biol Cell 23:918-29
Chen, Yan; Bai, Ping; Mackay, Shannon et al. (2011) Herpes simplex virus type 1 helicase-primase: DNA binding and consequent protein oligomerization and primase activation. J Virol 85:968-78
Francone, Victor P; Ifrim, Marius F; Rajagopal, Chitra et al. (2010) Signaling from the secretory granule to the nucleus: Uhmk1 and PAM. Mol Endocrinol 24:1543-58
Han, Siew Ping; Friend, Lexie R; Carson, John H et al. (2010) Differential subcellular distributions and trafficking functions of hnRNP A2/B1 spliceoforms. Traffic 11:886-98
Levin, Mikhail K; Hingorani, Manju M; Holmes, Raquell M et al. (2009) Model-based global analysis of heterogeneous experimental data using gfit. Methods Mol Biol 500:335-59
Eisenberg, Shlomo; Korza, George; Carson, John et al. (2009) Novel DNA binding properties of the Mcm10 protein from Saccharomyces cerevisiae. J Biol Chem 284:25412-20
Paradise, Allison; Levin, Mikhail K; Korza, George et al. (2007) Significant proportions of nuclear transport proteins with reduced intracellular mobilities resolved by fluorescence correlation spectroscopy. J Mol Biol 365:50-65
Kosturko, Linda D; Maggipinto, Michael J; Korza, George et al. (2006) Heterogeneous nuclear ribonucleoprotein (hnRNP) E1 binds to hnRNP A2 and inhibits translation of A2 response element mRNAs. Mol Biol Cell 17:3521-33

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