Salamanders (urodele amphibians) are important model organisms in several areas of human health and disease research, including limb regeneration, neural transmission, vision, renal function, embryo genesis, heart development, and olfaction. The utility of salamanders would be greatly extended if fundamental genome resources were developed and made available to researchers. The objective of the proposed project is to characterize and determine the genomic position of expressed sequences(ESTs)from regenerating limb and retina, two focal salamander tissues in biomedical research. Also, to make a more general contribution to salamander researchers, genes that correspond to previously published salamander sequences in Genbank will be mapped. The identification of ESTs and development of a genome map will be an important resource over the short term because it will allow: (1) construction of an EST database for salamander traits that are of special interest; (2) gene homologies to be determined between salamander and human; (3) candidate gene studies of existing salamander mutants; (4) quantitative trait locus analyses of complex phenotypes; and (5) reconstruction of vertebrate genome evolution. With respect to longer term goals, the proposed project will spur development of additional resources that will facilitate identification of salamander genes of biomedical significance.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Resource-Related Research Projects (R24)
Project #
5R24RR016344-04
Application #
6751718
Study Section
National Center for Research Resources Initial Review Group (RIRG)
Program Officer
Chang, Michael
Project Start
2002-08-16
Project End
2007-03-31
Budget Start
2004-04-01
Budget End
2005-03-31
Support Year
4
Fiscal Year
2004
Total Cost
$257,644
Indirect Cost
Name
University of Kentucky
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
939017877
City
Lexington
State
KY
Country
United States
Zip Code
40506
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Seifert, Ashley W; Monaghan, James R; Voss, S Randal et al. (2012) Skin regeneration in adult axolotls: a blueprint for scar-free healing in vertebrates. PLoS One 7:e32875
Voss, Stephen R; Kump, D Kevin; Putta, Srikrishna et al. (2011) Origin of amphibian and avian chromosomes by fission, fusion, and retention of ancestral chromosomes. Genome Res 21:1306-12
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