The Keck Center for Computational Biology has developed a strong multi disciplinary, multi-institutional training program in computational biology with this NLM program as its central core. We have formed the Gulf Coast Consortia (GCC) and expanded to encompass six area institutions: Baylor College of Medicine, Rice University, University of Houston, University of Texas M. D. Anderson Cancer Center, University of Texas Health Science Center-Houston, and University of Texas Medical Branch Galveston. The Keck Center will continue with its present organization as the training arm of the GCC, and individual research consortia will form around specific focus areas (e.g., Magnetic Resonance, Bioinformatics, Imaging) to seek funding for major equipment and for program projects in specific fields of interest. To meet the expanded need for trainees that accompanies our expansion to six institutions, we have requested support from the Keck Foundation and have developed proposals to the National Institutes of Health. Our trainees work at the interface of computing and biology, developing and applying advanced tools of informatics algorithms, simulation strategies, and visualization and analysis techniques to important problems. Our NLM trainees have compiled an outstanding record of scientific accomplishment, and many of our trainees have now assumed academic positions and posts of responsibility in industry. Our trainees are involved in work at the forefront of biological and biomedical sciences in the following focus areas: Informatics; Multidimensional and Functional Imaging; and Simulations of Macromolecular and Cellular Behavior. Core support provided by NLM for pre-doctoral and postdoctoral trainees in this program has been highly leveraged by the development of an effective and robust administrative structure, as reflected by our recent expansion to include six institutions. NLM funding combines with contributions from the institutions and from other funding sources to create a unique and highly effective training environment in an exciting and challenging research milieu.

Agency
National Institute of Health (NIH)
Institute
National Library of Medicine (NLM)
Type
Continuing Education Training Grants (T15)
Project #
5T15LM007093-13
Application #
6789418
Study Section
Special Emphasis Panel (ZLM1-MMR-T (J2))
Program Officer
Florance, Valerie
Project Start
1992-07-01
Project End
2007-06-30
Budget Start
2004-07-01
Budget End
2005-06-30
Support Year
13
Fiscal Year
2004
Total Cost
$341,383
Indirect Cost
Name
Rice University
Department
Type
Organized Research Units
DUNS #
050299031
City
Houston
State
TX
Country
United States
Zip Code
77005
Call, Lee; Stoll, Barbara; Oosterloo, Berthe et al. (2018) Metabolomic signatures distinguish the impact of formula carbohydrates on disease outcome in a preterm piglet model of NEC. Microbiome 6:111
Emerson, Charlene H; Lopez, Christopher R; Ribes-Zamora, Albert et al. (2018) Ku DNA End-Binding Activity Promotes Repair Fidelity and Influences End-Processing During Nonhomologous End-Joining in Saccharomyces cerevisiae. Genetics 209:115-128
Roh, Soung-Hun; Stam, Nicholas J; Hryc, Corey F et al. (2018) The 3.5-Å CryoEM Structure of Nanodisc-Reconstituted Yeast Vacuolar ATPase Vo Proton Channel. Mol Cell 69:993-1004.e3
Hendryx, Emily P; Rivière, Béatrice M; Sorensen, Danny C et al. (2018) Finding representative electrocardiogram beat morphologies with CUR. J Biomed Inform 77:97-110
Chen, Han; Li, Chunyan; Zhou, Zhicheng et al. (2018) Fast-Evolving Human-Specific Neural Enhancers Are Associated with Aging-Related Diseases. Cell Syst 6:604-611.e4
Chen, Han; Li, Chunyan; Peng, Xinxin et al. (2018) A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples. Cell 173:386-399.e12
Chiang, Sharon; Vankov, Emilian R; Yeh, Hsiang J et al. (2018) Temporal and spectral characteristics of dynamic functional connectivity between resting-state networks reveal information beyond static connectivity. PLoS One 13:e0190220
Hryc, Corey F; Chen, Dong-Hua; Afonine, Pavel V et al. (2017) Accurate model annotation of a near-atomic resolution cryo-EM map. Proc Natl Acad Sci U S A 114:3103-3108
Leung, Marco L; Davis, Alexander; Gao, Ruli et al. (2017) Single-cell DNA sequencing reveals a late-dissemination model in metastatic colorectal cancer. Genome Res 27:1287-1299
Puelz, Charles; ?ani?, Sun?ica; Rivière, Béatrice et al. (2017) Comparison of reduced models for blood flow using Runge-Kutta discontinuous Galerkin methods. Appl Numer Math 115:114-141

Showing the most recent 10 out of 242 publications