The progressive loss of CD4 lymphocytes correlates with the progression of HIV infection to AIDS. At present, other correlates of disease progression are lacking. Thus, routine immunophenotyping of HIV-infected individuals is justified. Unfortunately, analysis of other lymphocyte markers has not been sufficiently done to determine if they also can predict changes in the course of the disease. The immune system is a complex interaction of many cell types. A progressive decline in the CD4 lymphocyte compartment is likely to cause shifts in the proportions of other lymphocyte subsets. The question arises as to whether changes in other lymphocyte surface antigens correlate with disease progression and more ideally, stabilize or revert in response to efficacious drug therapy. In order to investigate this issue, single color immunofluorescence technology had to develop a dual color capability. With the use of 2-color immunofluorescence, some activation and differentiation markers on lymphocyte subset cells showed promise of being good correlates of disease progression. However, these markers were not investigated in the context of clinical trials to assess drug effectiveness. A major reason was the cost and time required to analyze an extensive panel of 2-color profile tubes. Recently a third fluorochrome for routine 3-color immunofluorescence has become commercially available. The proposed study hopes to utilize this newest technology to consolidate a number of 2-color profile tubes into a more limited panel of 3-color profile tubes. This would allow a more manageable evaluation of clinical specimens. In addition, combinations of 3 discrete antibodies to pinpoint a particular subpopulation of lymphocytes can now be routinely investigated. One of the goals of this research will be to validate and justify the switch from routine 2-color to 3-color analysis. This will enable a more aggressive analysis of lymphocytes from individuals enrolled in ACTG clinical trials using an expanded panel of 3-color analysis tubes. It is hoped that in the subsequent years of this project, routine 3-color immunophenotyping will identify and validate changes in lymphocyte subset markers that correlate with HIV disease progression and/or drug efficacy.

Project Start
Project End
Budget Start
Budget End
Support Year
9
Fiscal Year
1995
Total Cost
Indirect Cost
Name
Indiana University-Purdue University at Indianapolis
Department
Type
DUNS #
005436803
City
Indianapolis
State
IN
Country
United States
Zip Code
46202
Martin, Maureen P; Naranbhai, Vivek; Shea, Patrick R et al. (2018) Killer cell immunoglobulin-like receptor 3DL1 variation modifies HLA-B*57 protection against HIV-1. J Clin Invest 128:1903-1912
Haas, David W; Bradford, Yuki; Verma, Anurag et al. (2018) Brain neurotransmitter transporter/receptor genomics and efavirenz central nervous system adverse events. Pharmacogenet Genomics 28:179-187
Venuto, Charles S; Lim, Jihoon; Messing, Susan et al. (2018) Inflammation investigated as a source of pharmacokinetic variability of atazanavir in AIDS Clinical Trials Group protocol A5224s. Antivir Ther 23:345-351
Li, Binglan; Verma, Shefali S; Veturi, Yogasudha C et al. (2018) Evaluation of PrediXcan for prioritizing GWAS associations and predicting gene expression. Pac Symp Biocomput 23:448-459
Gupta, Samir K; Yeh, Eunice; Kitch, Douglas W et al. (2017) Bone mineral density reductions after tenofovir disoproxil fumarate initiation and changes in phosphaturia: a secondary analysis of ACTG A5224s. J Antimicrob Chemother 72:2042-2048
Verma, Anurag; Bradford, Yuki; Verma, Shefali S et al. (2017) Multiphenotype association study of patients randomized to initiate antiretroviral regimens in AIDS Clinical Trials Group protocol A5202. Pharmacogenet Genomics 27:101-111
Bednasz, Cindy J; Venuto, Charles S; Ma, Qing et al. (2017) Efavirenz Therapeutic Range in HIV-1 Treatment-Naive Participants. Ther Drug Monit 39:596-603
Verma, Shefali S; Frase, Alex T; Verma, Anurag et al. (2016) PHENOME-WIDE INTERACTION STUDY (PheWIS) IN AIDS CLINICAL TRIALS GROUP DATA (ACTG). Pac Symp Biocomput 21:57-68
Moore, Carrie B; Verma, Anurag; Pendergrass, Sarah et al. (2015) Phenome-wide Association Study Relating Pretreatment Laboratory Parameters With Human Genetic Variants in AIDS Clinical Trials Group Protocols. Open Forum Infect Dis 2:ofu113
Lehmann, David S; Ribaudo, Heather J; Daar, Eric S et al. (2015) Genome-wide association study of virologic response with efavirenz-containing or abacavir-containing regimens in AIDS clinical trials group protocols. Pharmacogenet Genomics 25:51-9

Showing the most recent 10 out of 181 publications