Rotaviruses (RVs) are the single most important cause of severe diarrhea in infants and young children worldwide. RV replicates predominantly in mature small intestinal epithelial cells. The young of many mammalian species are naturally infected with host-specific homologous RV that causes severe diarrheal disease virtually exclusively in that species. Replication of heterologous RV in the intestine is inefficient and this `species barrier' has been exploited to develop several licensed and candidate human RV vaccines. The mechanism for attenuated replication of these vaccines in humans is poorly understood due to lack of proper human models. Recent studies in a murine model of RV infection using both homologous murine RV and heterologous non-murine RV strains demonstrate that the failure to inhibit innate immunity by heterologous RV and restriction of target cell entry on a species-specific basis are the two critical determinants of host-specific replication in mice. The murine RV gene products most important in circumventing replication restriction are NSP1 and VP4. The mechanistic basis of modulating host-specific replication restriction involves suppression of the type I, II, and III interferon (IFN) responses via inhibition of IRF-3, NF-?B, and STAT1 signaling by NSP1 and modulation of viral binding to target epithelial cells mediated by VP4. Previous studies have compared murine and non-murine RV infection in vivo in suckling mice and/or murine cell culture but there is currently no information available to indicate whether or not host-range restriction in humans is mediated by identical, similar, or distinct mechanisms. In this proposal we will take advantage of a new, highly tractable human small intestinal organoid system that recapitulates the ability of human intestine to support vigorous replication of human origin RV strains but substantially restricts non-human origin RV strain replication. We will use this system and associated powerful single cell analytic tools to identify the genetic and mechanistic origins of RV replication restriction in people. Our work will expand our understanding of RV pathogenesis, will enhance our ability to design more effective third-generation RV vaccines and will increase our basic understanding of innate immunity in the human intestine.
The Aims of this proposal are to: 1) Determine the genetic basis of host-range restriction of non-human origin RV strains in primary human intestinal epithelial cells. 2) Define the mechanistic basis of host-range restriction of non-human origin RV in the human gut.

Public Health Relevance

Project Relevance Acute enteric infections in general and rotavirus infections in particular are a cause of considerable morbidity both in children and adults. The studies proposed here will take advantage of a highly tractable human enteric organoid system and novel single cell analytic tools to provide a better understanding of and increased knowledge about how to prevent the morbidity and mortality associated with enteric microbial pathogens.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Program--Cooperative Agreements (U19)
Project #
5U19AI116484-03
Application #
9221986
Study Section
Special Emphasis Panel (ZAI1-LG-M)
Project Start
Project End
Budget Start
2017-03-01
Budget End
2018-02-28
Support Year
3
Fiscal Year
2017
Total Cost
$168,177
Indirect Cost
Name
Stanford University
Department
Type
Domestic Higher Education
DUNS #
009214214
City
Stanford
State
CA
Country
United States
Zip Code
94304
Wosen, Jonathan E; Mukhopadhyay, Dhriti; Macaubas, Claudia et al. (2018) Epithelial MHC Class II Expression and Its Role in Antigen Presentation in the Gastrointestinal and Respiratory Tracts. Front Immunol 9:2144
Hartmann, Felix J; Simonds, Erin F; Bendall, Sean C (2018) A Universal Live Cell Barcoding-Platform for Multiplexed Human Single Cell Analysis. Sci Rep 8:10770
Ding, Siyuan; Zhu, Shu; Ren, Lili et al. (2018) Rotavirus VP3 targets MAVS for degradation to inhibit type III interferon expression in intestinal epithelial cells. Elife 7:
Haugh, Matthew G; Vaughan, Ted J; Madl, Christopher M et al. (2018) Investigating the interplay between substrate stiffness and ligand chemistry in directing mesenchymal stem cell differentiation within 3D macro-porous substrates. Biomaterials 171:23-33
Keren, Leeat; Bosse, Marc; Marquez, Diana et al. (2018) A Structured Tumor-Immune Microenvironment in Triple Negative Breast Cancer Revealed by Multiplexed Ion Beam Imaging. Cell 174:1373-1387.e19
LeSavage, Bauer L; Suhar, Nicholas A; Madl, Christopher M et al. (2018) Production of Elastin-like Protein Hydrogels for Encapsulation and Immunostaining of Cells in 3D. J Vis Exp :
Madl, Christopher M; Heilshorn, Sarah C; Blau, Helen M (2018) Bioengineering strategies to accelerate stem cell therapeutics. Nature 557:335-342
Nair, Nitya; Feng, Ningguo; Blum, Lisa K et al. (2017) VP4- and VP7-specific antibodies mediate heterotypic immunity to rotavirus in humans. Sci Transl Med 9:
Dubbin, Karen; Tabet, Anthony; Heilshorn, Sarah C (2017) Quantitative criteria to benchmark new and existing bio-inks for cell compatibility. Biofabrication 9:044102
Janda, Claudia Y; Dang, Luke T; You, Changjiang et al. (2017) Surrogate Wnt agonists that phenocopy canonical Wnt and ?-catenin signalling. Nature 545:234-237

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