Bridge C will carry out basic research with the objective to develop mass spectrometric techniques thatcan be used to generate images of the specific location and relative abundance of lipids in tissues and cells.In part, this research program builds on the success during the first award period of using matrix assistedlaser desorption ionization (MALDI) coupled to a quadrupole tandem time-of-flight mass spectrometer andapplication of matrix by sublimation onto thin tissues slices (10 um) to enhance ion yields followingirradiation of small areas of tissue (approximately 100 um2) with a focused laser beam. The resultantsecondary ions emitted are then mass analyzed and stored as the mass and intensity values at that pixel.The adjacent areas are irradiated sequentially to build a large database that can be used to generateimages specific to the lipid ion (m/z) as a function of position and ion abundance. Sublimation of matrix wasfound to minimize lipid lateral diffusion in tissues and allow generation of detailed images of tissues basedupon mass spectrometric pixels. Secondary ion mass spectrometry (SIMS) using Buckminster fullerene(C60+) ion beams will be systematically studied to bring lateral resolution of lipid imaging below 1 um so thatlipids in single cells can be detected and analyzed. Specific goals include development of derivatizationchemistry to enhance lipid secondary ion yield in MALDI and SIMS imaging experiments to allow discoveryof novel lipids. New tissue embedding materials will be developed and explored that will be specificallysuited for mass spectrometric imaging. The reproducibility of lipid anatomical images will be assessed byanalysis of sequential tissue slices as well as of identical tissue regions from different animals. Threedimensionalrendering of lipid images from sequential slices will be pursued using software developed forMALDI and SIMs data sets. A major focus will be imaging of aortas and atherosclerotic plaques as part ofthe LIPID MAPS coordinated studies to reveal anatomical locations of specific lipids including but not limitedto phospholipids, sphingolipids, and oxidized neutral lipids. In addition, this research will develop novel andpowerful research methods that can be used to examine tissues (biopsies) taken from human subjects formolecules that mark unique disease processes such as atherosclerosis and diabetes.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Specialized Center--Cooperative Agreements (U54)
Project #
2U54GM069338-06
Application #
7657199
Study Section
Special Emphasis Panel (ZGM1-CBB-5 (GL))
Project Start
2008-09-15
Project End
2013-07-31
Budget Start
2008-09-15
Budget End
2009-07-31
Support Year
6
Fiscal Year
2008
Total Cost
$480,907
Indirect Cost
Name
University of California San Diego
Department
Type
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
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