The structures and mechanisms of assembly of macromolecules and marcromolecular complexes are studied, primarily by high resolution electron microscopy complemented with computer image processing. Over the past year, our major efforts have been devoted to analysis of (i) the tail-fibers of bacteriophage T7; and (ii) frozen-hydrated transverse thin sections of skeletal muscle in the relaxed and rigor states. (i) The T7 tail-fiber represents an experimentally tractable example of a viral receptor-recognition protein. We have combined piece-wise correlation averaging of electron micrographs of molecules prepared both by negative staining and by freeze-drying without staining, with predictions based on the known sequence of the gp17 protein (553 residues), to formulate a detailed model of this fibrous protein. The fiber is a trimer a consists of three domains. The proximal and distal half-fibers are both rods approximately 16nm long, joined at a kink-angle of approximately 90 degrees and are linked to the virion by the third domain. Of particular interest is the proximal half-fiber which is a triple-stranded coiled-coil of alpha-helices, one of the few well-authenticated examples of this conformation. (ii) We have developed and applied methods for the analysis of frozen-hydrated transverse thin sections of muscle. Such images combine the advantages of good preservation of native structure (unlike conventional thin sections) and phase determinacy (unlike X-ray fiber diffraction). The results reveal differences between the distributions of density in muscle in the relaxed and rigor states.

Project Start
Project End
Budget Start
Budget End
Support Year
2
Fiscal Year
1987
Total Cost
Indirect Cost
Name
Arthritis, Musculoskeletal, Skin Dis
Department
Type
DUNS #
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State
Country
United States
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Newcomb, William W; Fontana, Juan; Winkler, Dennis C et al. (2017) The Primary Enveloped Virion of Herpes Simplex Virus 1: Its Role in Nuclear Egress. MBio 8:
Wu, Weimin; Newcomb, William W; Cheng, Naiqian et al. (2016) Internal Proteins of the Procapsid and Mature Capsids of Herpes Simplex Virus 1 Mapped by Bubblegram Imaging. J Virol 90:5176-86
Uetrecht, Charlotte; Versluis, Cees; Watts, Norman R et al. (2008) Stability and shape of hepatitis B virus capsids in vacuo. Angew Chem Int Ed Engl 47:6247-51
Watts, Norman R; Cardone, Giovanni; Vethanayagam, Joe G et al. (2008) Non-canonical binding of an antibody resembling a naive B cell receptor immunoglobulin to hepatitis B virus capsids. J Mol Biol 379:1119-29
Buck, Christopher B; Cheng, Naiqian; Thompson, Cynthia D et al. (2008) Arrangement of L2 within the papillomavirus capsid. J Virol 82:5190-7
Uetrecht, Charlotte; Versluis, Cees; Watts, Norman R et al. (2008) High-resolution mass spectrometry of viral assemblies: molecular composition and stability of dimorphic hepatitis B virus capsids. Proc Natl Acad Sci U S A 105:9216-20
Butan, Carmen; Winkler, Dennis C; Heymann, J Bernard et al. (2008) RSV capsid polymorphism correlates with polymerization efficiency and envelope glycoprotein content: implications that nucleation controls morphogenesis. J Mol Biol 376:1168-81
Sen, Anindito; Heymann, J Bernard; Cheng, Naiqian et al. (2008) Initial location of the RNA-dependent RNA polymerase in the bacteriophage Phi6 procapsid determined by cryo-electron microscopy. J Biol Chem 283:12227-31
Trus, Benes L; Newcomb, William W; Cheng, Naiqian et al. (2007) Allosteric signaling and a nuclear exit strategy: binding of UL25/UL17 heterodimers to DNA-Filled HSV-1 capsids. Mol Cell 26:479-89
Conway, James F; Cheng, Naiqian; Ross, Philip D et al. (2007) A thermally induced phase transition in a viral capsid transforms the hexamers, leaving the pentamers unchanged. J Struct Biol 158:224-32

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