Our investigations of the structure and function of the tryptophan synthase multienzyme complex are providing insights into mechanisms of catalysis, metabolite channeling, and allosteric interactions. Crystal structures reveal ligand-induced conformational changes that convert tryptophan synthase from an open form to a closed form. Investigations of the effects of temperature, pH, and guanidine hydrochloride on activity and on spectroscopic properties provide further evidence for allosteric interactions that trigger the open to closed conformational transition. Mutation of residues in the interaction site between the alpha and beta subunits alters the transmission of allosteric signals. Cystationine beta-synthase (CBS) is a pyridoxal phosphate dependent enzyme that is closely related to tryptophan synthase. Mutations in human CBS cause the genetic disease homocystinuria. To understand the effects of disease causing mutations on CBS structure and function, we have subcloned and overexpressed the closely related yeast CBS (56 kDa) and an N-terminal 39 kDa truncated fragment (tCBS) and have purified both enzymes to homogeneity. Spectroscopic studies demonstrate formation of a key enzyme substrate-intermediate and establish the overall catalytic mechanism. - enzymology, pyridoxal phosphate, tryptophan synthase, multienzyme complex, mutation, crystallography, channeling, allostery, cystathionine beta-synthase

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Intramural Research (Z01)
Project #
1Z01DK024140-33
Application #
6289724
Study Section
Special Emphasis Panel (LBG)
Project Start
Project End
Budget Start
Budget End
Support Year
33
Fiscal Year
1999
Total Cost
Indirect Cost
City
State
Country
United States
Zip Code
Jhee, K H; Yoshimura, T; Miles, E W et al. (2000) Stereochemistry of the transamination reaction catalyzed by aminodeoxychorismate lyase from Escherichia coli: close relationship between fold type and stereochemistry. J Biochem (Tokyo) 128:679-86
Jhee, K H; McPhie, P; Miles, E W (2000) Domain architecture of the heme-independent yeast cystathionine beta-synthase provides insights into mechanisms of catalysis and regulation. Biochemistry 39:10548-56
Fan, Y X; McPhie, P; Miles, E W (2000) Regulation of tryptophan synthase by temperature, monovalent cations, and an allosteric ligand. Evidence from Arrhenius plots, absorption spectra, and primary kinetic isotope effects. Biochemistry 39:4692-703
Fan, Y X; McPhie, P; Miles, E W (2000) Thermal repair of tryptophan synthase mutations in a regulatory intersubunit salt bridge. Evidence from arrhenius plots, absorption spectra, and primary kinetic isotope effects. J Biol Chem 275:20302-7
Jhee, K H; McPhie, P; Miles, E W (2000) Yeast cystathionine beta-synthase is a pyridoxal phosphate enzyme but, unlike the human enzyme, is not a heme protein. J Biol Chem 275:11541-4
Miles, E W; Davies, D R (2000) Protein evolution. On the ancestry of barrels. Science 289:1490
Ro, H S; Miles, E W (1999) Structure and function of the tryptophan synthase alpha(2)beta(2) complex. Roles of beta subunit histidine 86. J Biol Chem 274:36439-45
Fan, Y X; McPhie, P; Miles, E W (1999) Guanidine hydrochloride exerts dual effects on the tryptophan synthase alpha 2 beta 2 complex as a cation activator and as a modulator of the active site conformation. Biochemistry 38:7881-90
Miles, E W; Rhee, S; Davies, D R (1999) The molecular basis of substrate channeling. J Biol Chem 274:12193-6