This laboratory is interested in the relationshipbetween protein sequence, structure and the mechanisms of protein folding and enzymic reactions.(i) Histidine Rich Proteins We are reinvestigating the spectroscopic behaviour of poly L-histidine as a function of pH and solvent additives, in an effort to establish a set of reference circular dichroism spectra (CD) under defined conditions, which can be used in analysis of the structures of unusual proteins, produced by malaria parasites. The polypeptides CD spectrum is found to be a complex function of pH and solvent composition which is most easily interpreted by assuming the presence of different forms with unique molecular conformations.(ii) Structure of Tryptophan Synthase (with Dr. Edith Wilson Miles and coworkers, LBP) We are investigating the conformational states of the tryptophan synthase alpha2-beta2 complex and their relevance in the enzymatic mechanism of the protein.(iii) Structure of Mammalian Sulphotransferases. (with Dr. D. Marshall and Dr. W.B. Jakoby, LBM) The enzymatic activity of a phenol sulphotransferase, from rat liver, has been shown to be regulated by reversible oxidation/reduction of a conserved specific cysteine residue by physiological concentrations of glutathione. Oxdation cysteine residue 66 inhibits thephysiological activity of the enzyme by very tight substrate inhibition. This mechanism may be important under conditions of oxidative stress to the liver.(iv) Interaction of Neurogranin with Calmodulin. (with Dr. K.P. Huang, ERRB, NICHD) In the absence of calcium, neurorgranin forms an inactive complex with calmodulin, which can be detected by anincrease in alpha-helical conent of the proteins. The formation of the complex can be regulated by variations in calcium ion concentrations or by oxidation/reduction of a pair of conservedcysteine residues in neurogranin. (v) Structure and Interactions of Proline rich Proteins from Human Saliva (with Dr. R. I. Henkin, Georgetown University). We are studying the effects of sovent additives and other proteins on the CD spectra of physiologically important proteins isolated from saliva. - protein, structure, function, folding, spectroscopy, circular-dichroism, thermodynamics, kinetics.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Intramural Research (Z01)
Project #
1Z01DK024942-07
Application #
6289729
Study Section
Large Bowel and Pancreatic Cancer Review Committee (LBP)
Project Start
Project End
Budget Start
Budget End
Support Year
7
Fiscal Year
1999
Total Cost
Indirect Cost
City
State
Country
United States
Zip Code
McPhie, Peter; Ni, Yi-sheng; Minton, Allen P (2006) Macromolecular crowding stabilizes the molten globule form of apomyoglobin with respect to both cold and heat unfolding. J Mol Biol 361:7-10
Jang, Ming Y; Yarborough 3rd, Orlando H; Conyers, Gary B et al. (2005) Stable secondary structure near the nicking site for adeno-associated virus type 2 Rep proteins on human chromosome 19. J Virol 79:3544-56
Handa, Vaishali; Yeh, Herman J C; McPhie, Peter et al. (2005) The AUUCU repeats responsible for spinocerebellar ataxia type 10 form unusual RNA hairpins. J Biol Chem 280:29340-5
Britto, P J; Knipling, Leslie; McPhie, Peter et al. (2005) Thiol-disulphide interchange in tubulin: kinetics and the effect on polymerization. Biochem J 389:549-58
Miller, Lance D; McPhie, Peter; Suzuki, Hideyo et al. (2004) Multi-tissue gene-expression analysis in a mouse model of thyroid hormone resistance. Genome Biol 5:R31
McPhie, Peter (2004) CD studies on films of amyloid proteins and polypeptides: quantitative g-factor analysis indicates a common folding motif. Biopolymers 75:140-7
Kalinin, Andrey E; Idler, William W; Marekov, Lyuben N et al. (2004) Co-assembly of envoplakin and periplakin into oligomers and Ca(2+)-dependent vesicle binding: implications for cornified cell envelope formation in stratified squamous epithelia. J Biol Chem 279:22773-80
Sasahara, Kenji; McPhie, Peter; Minton, Allen P (2003) Effect of dextran on protein stability and conformation attributed to macromolecular crowding. J Mol Biol 326:1227-37
Ahmed, S Ashraf; McPhie, Peter; Smith, Leonard A (2003) Autocatalytically fragmented light chain of botulinum a neurotoxin is enzymatically active. Biochemistry 42:12539-49
Kamiya, Yuji; Puzianowska-Kuznicka, Monika; McPhie, Peter et al. (2002) Expression of mutant thyroid hormone nuclear receptors is associated with human renal clear cell carcinoma. Carcinogenesis 23:25-33

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