Kinetic experiments using a new generation of techniques with dramatically improved time resolution have contributed significantly to our understanding of mechanisms in protein folding. Optical triggering with nanosecond laser pulses and improvement in the time resolution of mixing experiments has made it possible to study the fastest-folding proteins as well as fundamental processes in folding for the first time. These include formation of alpha-helices, beta-sheets, and contacts between residues distant in sequence, as well as overall collapse of the polypeptide chain. Simple statistical mechanical models have been developed which are extremely useful in interpreting the experimental results. One of the surprises is that a model developed for explaining the fast kinetics of secondary structure formation in isolated peptides is also successful in calculating folding rates of small proteins from their native structure.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Intramural Research (Z01)
Project #
1Z01DK029010-28
Application #
6432087
Study Section
(LCP)
Project Start
Project End
Budget Start
Budget End
Support Year
28
Fiscal Year
2000
Total Cost
Indirect Cost
Name
U.S. National Inst Diabetes/Digst/Kidney
Department
Type
DUNS #
City
State
Country
United States
Zip Code
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