Multiple antibiotic resistance in bacteria is a serious clinical problem. Our studies on Escherichia coli have shown that it resists a variety of antibiotics, organic solvents and superoxides by increased transcription of a set of about 40 genes called the mar/sox/rob regulon. The increased transcription can be accomplished by any one of three homologous, but separately regulated, activator proteins, MarA, SoxS or Rob. Our recent studies of the regulation of these activators has revealed a novel form of environmental cross-talk.? ? We have previously shown that marA transcription is increased in cells exposed to salicylate (SAL) by a mechanism involving SAL binding to the MarR protein and thereby preventing it from repressing the marA promoter. We had also shown that 2,2?-dipyridyl (DIP) enhances the activity of the abundant but inactive Rob protein by binding Rob post-translationally. Others (Demple; Weiss) have shown that SoxS transcription is activated by SoxR after SoxR has been converted to an oxidized form by superoxides. We now report that SoxS expression can also be elevated by treatment of the bacteria with SAL or DIP but by mechanisms that seem unrelated to those whereby they activate MarA and Rob, respectively.? ? Using promoters fused to lacZ, we could precisely measure the effects of SAL and DIP on transcription of the promoters even in the absence of the wild-type soxR or soxS structural gene. A small but significant activation of soxR and soxS transcription by SAL was found in cells deleted for both the mar and rob genetic systems. This effect required wild type SoxR to be present. A somewhat greater effect was seen with DIP. Since DIP is a strong chelator of Fe and since SoxR requires Fe-S clusters for repressional activity, our working hypothesis is that DIP strips SoxR of Fe thereby preventing it from autorepressing its own promoter resulting in higher transcriptional activity. A similar mechanism has been suggested for IscR, the regulator of an operon that is responsible for Fe-S cluster formation. When stripped of Fe, IscR loses its autorepressor activity and becomes an activator of other promoters. The next challenges are to understand (a) how SoxR can transcriptionally activate soxS if the normal Fe-S clusters have been altered or removed and (b) what is the evolutionary significance of environmental cross-talk of SAL and DIP with mar, sox and rob.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Intramural Research (Z01)
Project #
1Z01DK036003-22
Application #
7337461
Study Section
(LMB)
Project Start
Project End
Budget Start
Budget End
Support Year
22
Fiscal Year
2006
Total Cost
Indirect Cost
Name
U.S. National Inst Diabetes/Digst/Kidney
Department
Type
DUNS #
City
State
Country
United States
Zip Code
Rosner, Judah L; Martin, Robert G (2009) An excretory function for the Escherichia coli outer membrane pore TolC: upregulation of marA and soxS transcription and Rob activity due to metabolites accumulated in tolC mutants. J Bacteriol 191:5283-92
Zhang, Aixia; Rosner, Judah L; Martin, Robert G (2008) Transcriptional activation by MarA, SoxS and Rob of two tolC promoters using one binding site: a complex promoter configuration for tolC in Escherichia coli. Mol Microbiol 69:1450-5
Martin, Robert G; Bartlett, Emily S; Rosner, Judah L et al. (2008) Activation of the Escherichia coli marA/soxS/rob regulon in response to transcriptional activator concentration. J Mol Biol 380:278-84
Kawano, Mitsuoki; Storz, Gisela; Rao, B Sridhar et al. (2005) Detection of low-level promoter activity within open reading frame sequences of Escherichia coli. Nucleic Acids Res 33:6268-76
Martin, Robert G; Rosner, Judah L (2004) Transcriptional and translational regulation of the marRAB multiple antibiotic resistance operon in Escherichia coli. Mol Microbiol 53:183-91
Dangi, Bindi; Gronenborn, Angela M; Rosner, Judah L et al. (2004) Versatility of the carboxy-terminal domain of the alpha subunit of RNA polymerase in transcriptional activation: use of the DNA contact site as a protein contact site for MarA. Mol Microbiol 54:45-59
Thomason, Lynn C; Court, Donald L; Datta, Atin R et al. (2004) Identification of the Escherichia coli K-12 ybhE gene as pgl, encoding 6-phosphogluconolactonase. J Bacteriol 186:8248-53
Martin, Robert G; Rosner, Judah L (2003) Analysis of microarray data for the marA, soxS, and rob regulons of Escherichia coli. Methods Enzymol 370:278-80
Martin, Robert G; Gillette, William K; Martin, Nicholas I et al. (2002) Complex formation between activator and RNA polymerase as the basis for transcriptional activation by MarA and SoxS in Escherichia coli. Mol Microbiol 43:355-70
Martin, Robert G; Rosner, Judah L (2002) Genomics of the marA/soxS/rob regulon of Escherichia coli: identification of directly activated promoters by application of molecular genetics and informatics to microarray data. Mol Microbiol 44:1611-24

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