This project seeks to develop new statistical tools for evaluating gene-environment interactions and genetic susceptibility. Work has proceeded in the area of improving study designs and associated techniques for data analysis. Geneticists have proposed using cases and their parents (case-parents triads) to study genetic effects on disease risk while overcoming the problem of population stratification or admixture. If a population consists of a number of distinct subpopulations that differ in baseline disease rates and in the frequency of a genetic variant, case-control studies may find associations between the variant and disease that arise simply because of the differing characteristics of the subpopulations. Such associations lack etiologic import. Case-parents triad designs can eliminate such potentially misleading associations. We are investigating designs that augment case-parents triads with control-parents triads to overcome some shortcomings of using case-parents triads alone. Such designs should more fully extend protection against population structure to studies of genotype and exposure together.

Agency
National Institute of Health (NIH)
Institute
National Institute of Environmental Health Sciences (NIEHS)
Type
Intramural Research (Z01)
Project #
1Z01ES045002-06
Application #
6504694
Study Section
(BB)
Project Start
Project End
Budget Start
Budget End
Support Year
6
Fiscal Year
2001
Total Cost
Indirect Cost
Name
U.S. National Inst of Environ Hlth Scis
Department
Type
DUNS #
City
State
Country
United States
Zip Code
Shi, Min; Umbach, David M; Weinberg, Clarice R (2015) Using parental phenotypes in case-parent studies. Front Genet 6:221
Shi, Min; Umbach, David M; Weinberg, Clarice R (2014) Disentangling pooled triad genotypes for association studies. Ann Hum Genet 78:345-56
Weinberg, Clarice R; Shi, Min; DeRoo, Lisa A et al. (2014) Asymmetry in family history implicates nonstandard genetic mechanisms: application to the genetics of breast cancer. PLoS Genet 10:e1004174
Kim, Jinsil; Stirling, Kara J; Cooper, Margaret E et al. (2013) Sequence variants in oxytocin pathway genes and preterm birth: a candidate gene association study. BMC Med Genet 14:77
Shi, Min; Umbach, David M; Weinberg, Clarice R (2013) Case-sibling studies that acknowledge unstudied parents and permit the inclusion of unmatched individuals. Int J Epidemiol 42:298-307
Shi, Min; Weinberg, Clarice R (2011) How much are we missing in SNP-by-SNP analyses of genome-wide association studies? Epidemiology 22:845-7
Weinberg, Clarice R; Shi, Min; Umbach, David M (2011) A sibling-augmented case-only approach for assessing multiplicative gene-environment interactions. Am J Epidemiol 174:1183-9
Shi, Min; Umbach, David M; Weinberg, Clarice R (2011) Family-based gene-by-environment interaction studies: revelations and remedies. Epidemiology 22:400-7
Yim, Hyeon Woo; Slebos, Robbert J C; Randell, Scott H et al. (2007) Smoking is associated with increased telomerase activity in short-term cultures of human bronchial epithelial cells. Cancer Lett 246:24-33
Terry, Paul D; Umbach, David M; Taylor, Jack A (2006) APE1 genotype and risk of bladder cancer: evidence for effect modification by smoking. Int J Cancer 118:3170-3

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