Due to the increased prevalence of multidrug resistant bacterial pathogens such as enterococci resistant to vancomycin (VRE), we have been engaged in studies to enhance the therapeutic efficacy of bacterial viruses or bacteriophages (phages). Most phages are very specific to the species or strain of bacteria. Although this specificity may limit the usefulness of phage therapy, it may be clinically useful, because such phages can be targeted to the specific infectious bacteria and will not affect the normal flora of the body. However in certain situations such as in urinary tract infections with strains of E. coli. it would be useful to have a single phage that could affect more than one pathogenic strain to address this problem. We characterized E. coli phages that are specific for certain pathogenic K antigen strains. In this group of phages, host range is determined by presence of specific hydrolytic tail proteins. We discovered that if a phage contains genes for more than one specific hydrolytic tail protein, such phage are polyvalent in their capacity to infect more than one strain of bacteria, expressing an outer capsule that can serve as a substrate for that hydrolytic enzyme found on the phage tail. This discovery allows us to develop additional phage with extended host ranges. A patent has been filed, """"""""Bacteriophage having multiple host range"""""""", Merril, C.R., Scholl,D. and Adhya,S. reference numbers: NIH205.001PR, and manuscripts have been published in J. Virology and J. Bacteriology. We have now completed the genome sequence of one of these phages, K1-5, and have submitted a manuscript to the J. Molecular Biology involving comparative genomics of this phage and a similar phage, SP6, in collaboration with I. Molineux of the Univ. of TX and S. Adhya of the NCI. In addition, we have isolated and characterized several other phages with different host specificities which we are currently sequencing to determine the mode of host specificity. A 3 yr. NIAID biodefense proposal for intramural biodefense research has been funded to study bacteriophage therapy for antibiotic resistant Y. pestis (plague) and to develop phage based detection methods for plague. Two researches have been hired and work has begun on this project in collaboration with Dr. Adhya in the NCI. In relation, Dr. Merril was invited to participate in """"""""Bioterrorism and Biotechnology: Anticipating Future Threats and Countermeasures"""""""" hosted by the National Research Council, Virginia, January 2003. In addition, given the importance of rapidly determining whether a particular phage will be effective as an antibacterial therapeutic agent, we are currently developing phage that express reporter genes. Prior to this, determination was performed by plaque assays that can take from 12 hrs to several days to develop. We are currently developing methods for incorporating reporter genes, such as b-galactosidase or luciferase genes into phages that may be of clinical use as antibacterial agents. An invention report, """"""""Reporter Bacteriophage to Determine Sensitivity of a Clinical Bacterial Isolate to a Therapeutic Bacteriophage"""""""", Merril, C.R., Scholl,D. and Adhya,S., has been submitted. Previous studies in this laboratory demonstrated that phage administered to animals was rapidly removed by the host defense systems, particularly the organs of the reticuloendothelial system (RES). To reduce phage elimination by the host defense system, we developed a serial passage technique in mice to select for phage mutants able to remain in the circulatory system for longer periods of time. By this approach we isolated long-circulating mutants of phage for a number of different species of bacteria. We also demonstrated that these long-circulating phage mutants have greater capability as antibacterial agents than the corresponding parental strain in animals infected with lethal doses of bacteria. Additional experiments have helped us to make progress in determining exactly what mutations in phage give it long circulating properties. Other factors known to have impeded therapeutic antibacterial applications of phage include: the failure to recognize the relatively narrow host range of phages and the presence of toxins in unpurified phage. In our studies involving bacteremic mice, the problem of the narrow host range of phage was dealt with by using selected bacterial strains and virulent phage specific for them. Toxin levels were diminished by purifying phage preparations. In these efforts we have isolated bacteriophage with activity against enterococci resistant to vancomycin (VRE). The emergence of VRE poses a problem for patients with immune deficiency related illnesses (including those who have been immune suppressed for organ transplantation). From a clinical point of view, there are currently few therapeutic agents commercially available with established efficacy for patients infected by VRE. We tested the ability of phage to rescue mice infected with lethal doses of a strain of VRE isolated from a human infection. Our studies demonstrated a dose response for the phage titers used to rescue VRE infected mice. Experiments were also performed that demonstrate that phage could be used to rescue mice late in the course of a VRE illness. A manuscript concerning this work was published in Infection and Immunity. Two additional concerns have confronted those interested in the use of phage as an antibacterial agent. The first, has been a belief that bacteria will quickly develop resistance to phage. In a comparative study, by Smith and Huggins, of mice given potentially lethal intramuscular or intracereberal injections of bacteria, a single intramuscular dose of phage was more effective than multiple intramuscular injections of: tetracycline, ampicillin, choramphenicaol or trimethoprim plus sulphafuraxole. The authors noted that the therapeutic success of phage was due to its high in vivo activity and the failure of phage-resistant mutants to proliferate during treatment. Levin and Bull repeated this study with similar results. The second concern is that the FDA would never approve the use of a virus to treat bacterial infections. It should be noted that a phage, phiX174, has been approved as a marker for assessing the immune response in AIDs and other immune deficient patients. The Laboratory is maintaining the Phage-Tech Interest Group (PhTIG), and is involved in the establishment of a phage applications web site: www.nih.gov/sigs/phtig/.

Agency
National Institute of Health (NIH)
Institute
National Institute of Mental Health (NIMH)
Type
Intramural Research (Z01)
Project #
1Z01MH002702-09
Application #
6823925
Study Section
(LBG)
Project Start
Project End
Budget Start
Budget End
Support Year
9
Fiscal Year
2003
Total Cost
Indirect Cost
Name
U.S. National Institute of Mental Health
Department
Type
DUNS #
City
State
Country
United States
Zip Code
Kyuregyan, Karen K; Poleschuk, Valentina F; Zamyatina, Natalya A et al. (2005) Acute GB virus B infection of marmosets is accompanied by mutations in the NS5A protein. Virus Res 114:154-7
Adhya, Sankar; Black, Lindsay; Friedman, David et al. (2005) 2004 ASM Conference on the New Phage Biology: the 'Phage Summit'. Mol Microbiol 55:1300-14
Scholl, Dean; Adhya, Sankar; Merril, Carl (2005) Escherichia coli K1's capsule is a barrier to bacteriophage T7. Appl Environ Microbiol 71:4872-4
Scholl, D; Kieleczawa, J; Kemp, P et al. (2004) Genomic analysis of bacteriophages SP6 and K1-5, an estranged subgroup of the T7 supergroup. J Mol Biol 335:1151-71
Merril, Carl R; Scholl, Dean; Adhya, Sankar L (2003) The prospect for bacteriophage therapy in Western medicine. Nat Rev Drug Discov 2:489-97
Scholl, Dean; Adhya, Sankar; Merril, Carl R (2002) Bacteriophage SP6 is closely related to phages K1-5, K5, and K1E but encodes a tail protein very similar to that of the distantly related P22. J Bacteriol 184:2833-6
Biswas, Biswajit; Adhya, Sankar; Washart, Paul et al. (2002) Bacteriophage therapy rescues mice bacteremic from a clinical isolate of vancomycin-resistant Enterococcus faecium. Infect Immun 70:204-10
Scholl, D; Rogers, S; Adhya, S et al. (2001) Bacteriophage K1-5 encodes two different tail fiber proteins, allowing it to infect and replicate on both K1 and K5 strains of Escherichia coli. J Virol 75:2509-15