The PapillomaVirus Episteme (PaVE) has been established to provide information and bioinformatics resources to the scientific community for research on the Papillomaviridae family of viruses. The PaVE consists of a relational database and web applications that support the storage, annotation, analysis, and exchange of information. PAVE can be found at http://pave.niaid.nih.gov PaVe contains genomic and protein sequences for all papillomaviruses. It includes a multiple sequence alignment tool, a protein structure viewer, a viral typing tool and an Image viewer for visualizing clinical manifestations of viral infection. Linked review articles provided detailed information about all aspects of functional genomics of papillomaviruses.
| Mirabello, Lisa; Clarke, Megan A; Nelson, Chase W et al. (2018) The Intersection of HPV Epidemiology, Genomics and Mechanistic Studies of HPV-Mediated Carcinogenesis. Viruses 10: |
| Van Doorslaer, Koenraad; Chen, Zigui; Bernard, Hans-Ulrich et al. (2018) ICTV Virus Taxonomy Profile: Papillomaviridae. J Gen Virol 99:989-990 |
| Van Doorslaer, Koenraad; Li, Zhiwen; Xirasagar, Sandhya et al. (2017) The Papillomavirus Episteme: a major update to the papillomavirus sequence database. Nucleic Acids Res 45:D499-D506 |
| Van Doorslaer, Koenraad; McBride, Alison A (2016) Molecular archeological evidence in support of the repeated loss of a papillomavirus gene. Sci Rep 6:33028 |
| Buck, Christopher B; Van Doorslaer, Koenraad; Peretti, Alberto et al. (2016) The Ancient Evolutionary History of Polyomaviruses. PLoS Pathog 12:e1005574 |
| Van Doorslaer, Koenraad (2013) Evolution of the Papillomaviridae. Virology : |
| Van Doorslaer, Koenraad; Tan, Qina; Xirasagar, Sandhya et al. (2013) The Papillomavirus Episteme: a central resource for papillomavirus sequence data and analysis. Nucleic Acids Res 41:D571-8 |
| Lambert, Paul F; McBride, Alison; Ulrich Bernard, Hans (2013) Special issue: The Papillomavirus Episteme. Virology : |
| Buck, Christopher B; Phan, Giao Q; Raiji, Manish T et al. (2012) Complete genome sequence of a tenth human polyomavirus. J Virol 86:10887 |
