The long-range goal of this project is to understand the mechanism and control of a recombination reaction, the transposition of the bacterial transposition Tn7 which encodes resistances to trimethoprim and to streptomycin and spectinomycin. In contrast to most other transposable elements which move at low frequency and show little target site selectivity, Tn7 inserts at high frequency into a specific site called attTn7. When attTn7 is unavailable, Tn7 inserts at low frequency into many other sites. Tn7 is an elaborate element: it encodes five transposition genes which mediate several distinct recombination reactions and utilizes large DNA segments at the ends of Tn7 and at its target sites as recombination substrates.
A specific aim of the studies proposed here is to use biochemical methods develop an in vitro Tn7 transposition system in which purified proteins direct the recombination of defined DNA substrates. This will allow the identification of both Tn7- and host-encoded transposition recombination proteins. Another specific aim is to use this purified system to dissect the transposition reaction mechanism at the molecular level. Genetic methods will be used to achieve two other related specific aims: 1) identification of host genes encoding proteins either directly involved in Tn7 recombination or which regulate this process, and 2) production of mutant transposition proteins whose altered activities will allow identification of key steps in recombination. Genetic methods will also be used to pursue another specific aims, understanding cellular responses to Tn7 transposition. The result of these studies will provide important insights into protein- DNA interaction and DNA structure. They will also contribute to a deeper understanding of the interactions between mobile elements and their hosts and of the rapid dispersal of antibiotic resistance determinants.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM053824-16
Application #
2838623
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1984-07-01
Project End
2000-03-31
Budget Start
1998-12-01
Budget End
2000-03-31
Support Year
16
Fiscal Year
1999
Total Cost
Indirect Cost
Name
Johns Hopkins University
Department
Biochemistry
Type
Schools of Medicine
DUNS #
045911138
City
Baltimore
State
MD
Country
United States
Zip Code
21218
Stellwagen, A E; Craig, N L (2001) Analysis of gain-of-function mutants of an ATP-dependent regulator of Tn7 transposition. J Mol Biol 305:633-42
Peters, J E; Craig, N L (2001) Tn7 recognizes transposition target structures associated with DNA replication using the DNA-binding protein TnsE. Genes Dev 15:737-47
Rao, J E; Craig, N L (2001) Selective recognition of pyrimidine motif triplexes by a protein encoded by the bacterial transposon Tn7. J Mol Biol 307:1161-70
Kuduvalli, P N; Rao, J E; Craig, N L (2001) Target DNA structure plays a critical role in Tn7 transposition. EMBO J 20:924-32
Biery, M C; Stewart, F J; Stellwagen, A E et al. (2000) A simple in vitro Tn7-based transposition system with low target site selectivity for genome and gene analysis. Nucleic Acids Res 28:1067-77
Peters, J E; Craig, N L (2000) Tn7 transposes proximal to DNA double-strand breaks and into regions where chromosomal DNA replication terminates. Mol Cell 6:573-82
Rao, J E; Miller, P S; Craig, N L (2000) Recognition of triple-helical DNA structures by transposon Tn7. Proc Natl Acad Sci U S A 97:3936-41
Sharpe, P L; Craig, N L (1998) Host proteins can stimulate Tn7 transposition: a novel role for the ribosomal protein L29 and the acyl carrier protein. EMBO J 17:5822-31
Gwinn, M L; Stellwagen, A E; Craig, N L et al. (1997) In vitro Tn7 mutagenesis of Haemophilus influenzae Rd and characterization of the role of atpA in transformation. J Bacteriol 179:7315-20
Stellwagen, A E; Craig, N L (1997) Avoiding self: two Tn7-encoded proteins mediate target immunity in Tn7 transposition. EMBO J 16:6823-34

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