We propose this renewal of RO1 HL67406 """"""""Prediction and Progression of Carotid Artery Disease"""""""" (CAAD). CAAD is an important risk factor for stroke, the third leading cause of death in the U.S., and its risk factors overlap significantly with those of coronary artery disease, the major cause of death. Strong evidence of an important role of lipoprotein and vessel wall oxidation in vascular disease has emerged from both animal and human studies. As outlined in the Progress section, this multidisciplinary project has established that low paraoxonase (PON1) activity is predictive of CAAD, identified additional functional variation in PON1, evaluated the role of PON1 functional genotype and haplotypes effects in CAAD progression and prediction, and examined the linkage disequilibrium structure of PON1 and its effects on outcome prediction. We propose to continue and expand upon these productive studies, expanding our analyses to all common variation in a group of 29 low density lipoprotein and vessel wall oxidation pathway genes using a tagSNP approach as well as to 4 oxidative phenotypes that have been implicated in vascular disease prediction by ourselves or others. These phenotypes are LDL susceptibility to oxidation, PON1 activity, myeloperoxidase protein level, and glutathione peroxidase level, 3 of which at least preliminarily predict case status in our cohort. In addition to examining these factors in cases and controls, we will examine them in a unique 36 month longitudinal carotid magnetic resonance imaging (MR) progression dataset. This will allow us to evaluate whether these oxidative loci and phenotypes impact progression, as well as risk, of disease.
Major aims are:
Aim 1 : Identify common genetic variation in 29 oxidative loci that predict either CAAD case-control status or progression of CAAD measured by magnetic resonance imaging (MR).
Aim 2 : Investigate the role of oxidative phenotypes myeloperoxidase, glutatione peroxidase, LDL susceptibility to ex vivo oxidation, and PON1 activity in the prediction of CAAD case-control status and progression measured by MR.
Aim 3 : Pathway evaluation of oxidative loci and phenotypes in prediction of CAAD. ? ? ?

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Project (R01)
Project #
5R01HL067406-06
Application #
7281967
Study Section
Cardiovascular and Sleep Epidemiology (CASE)
Program Officer
Paltoo, Dina
Project Start
2001-10-01
Project End
2010-06-30
Budget Start
2007-07-01
Budget End
2008-06-30
Support Year
6
Fiscal Year
2007
Total Cost
$659,924
Indirect Cost
Name
University of Washington
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
605799469
City
Seattle
State
WA
Country
United States
Zip Code
98195
Holzinger, Emily R; Verma, Shefali S; Moore, Carrie B et al. (2017) Discovery and replication of SNP-SNP interactions for quantitative lipid traits in over 60,000 individuals. BioData Min 10:25
Furlong, Clement E; Marsillach, Judit; Jarvik, Gail P et al. (2016) Paraoxonases-1, -2 and -3: What are their functions? Chem Biol Interact 259:51-62
Kim, Daniel Seung; Burt, Amber A; Ranchalis, Jane E et al. (2015) PLTP activity inversely correlates with CAAD: effects of PON1 enzyme activity and genetic variants on PLTP activity. J Lipid Res 56:1351-62
Lange, Leslie A; Hu, Youna; Zhang, He et al. (2014) Whole-exome sequencing identifies rare and low-frequency coding variants associated with LDL cholesterol. Am J Hum Genet 94:233-45
Hutchins, Patrick M; Ronsein, Graziella E; Monette, Jeffrey S et al. (2014) Quantification of HDL particle concentration by calibrated ion mobility analysis. Clin Chem 60:1393-401
Xu, Dongxiang; Hippe, Daniel S; Underhill, Hunter R et al. (2014) Prediction of high-risk plaque development and plaque progression with the carotid atherosclerosis score. JACC Cardiovasc Imaging 7:366-73
Kim, Daniel Seung; Burt, Amber A; Rosenthal, Elisabeth A et al. (2014) HDL-3 is a superior predictor of carotid artery disease in a case-control cohort of 1725 participants. J Am Heart Assoc 3:e000902
Kim, Daniel Seung; Maden, Sean K; Burt, Amber A et al. (2013) Dietary fatty acid intake is associated with paraoxonase 1 activity in a cohort-based analysis of 1,548 subjects. Lipids Health Dis 12:183
Kim, Daniel S; Burt, Amber A; Ranchalis, Jane E et al. (2013) Novel gene-by-environment interactions: APOB and NPC1L1 variants affect the relationship between dietary and total plasma cholesterol. J Lipid Res 54:1512-20
Kim, Daniel S; Burt, Amber A; Crosslin, David R et al. (2013) Novel common and rare genetic determinants of paraoxonase activity: FTO, SERPINA12, and ITGAL. J Lipid Res 54:552-60

Showing the most recent 10 out of 38 publications