The advance of genomics has led to the definition of thousands of human genes as well as the identification of a significant proportion of genes in non-human organisms. We are utilizing these advanced genomic resources coupled with modern engineering and informatics capabilities to establish and maintain a state-of-the-art cDNA microarray center laboratory. The mission of the NIEHS Intramural Microarray Center (NMC) is to develop a research program in the Division of Intramural Research at the NIEHS that utilizes the advances in genomics to address critical threats to human health as a consequence of environmental exposures, specifically incorporating genome-wide gene expression analysis using microarray technology, with the goal of reducing or eliminating these threats to human health. In order to accomplish this mission, the goals of the NMC include: 1) the pursuit of mechanistic investigations of the impact of exposures on gene expression and alterations in critical cellular regulatory pathways, 2) the utilization of global gene expression changes following environmental stresses to identify specific changes, using bioinformatics tools, that are tightly linked with a deleterious human health outcome as patterns or biomarkers of a particular disease or toxic outcome, and 3) the continual development of new and better approaches to address genome-wide changes in gene expression. One consequence of this research program will be the accumulation of global gene expression information that will contribute to the population of an environmental health and toxicogenomics gene expression database. Such a public database will allow scientists to better understand the mechanism of action of environmental agents on human health and better evaluate the consequences associated with such exposures prior to the appearance of pathological presentation. This information may allow for the intervention and prevention of disease outcomes.

Agency
National Institute of Health (NIH)
Institute
National Institute of Environmental Health Sciences (NIEHS)
Type
Intramural Research (Z01)
Project #
1Z01ES023026-04
Application #
6681923
Study Section
(NCT)
Project Start
Project End
Budget Start
Budget End
Support Year
4
Fiscal Year
2002
Total Cost
Indirect Cost
Name
U.S. National Inst of Environ Hlth Scis
Department
Type
DUNS #
City
State
Country
United States
Zip Code
Ferrucio, Bianca; Tiago, Manoela; Fannin, Richard D et al. (2017) Molecular effects of 1-naphthyl-methylcarbamate and solar radiation exposures on human melanocytes. Toxicol In Vitro 38:67-76
Cui, Yuxia; Huang, Qihong; Auman, James Todd et al. (2011) Genomic-derived markers for early detection of calcineurin inhibitor immunosuppressant-mediated nephrotoxicity. Toxicol Sci 124:23-34
Kienhuis, Anne S; van de Poll, Marcel C G; Wortelboer, Heleen et al. (2009) Parallelogram approach using rat-human in vitro and rat in vivo toxicogenomics predicts acetaminophen-induced hepatotoxicity in humans. Toxicol Sci 107:544-52
Chou, Jeff W; Zhou, Tong; Kaufmann, William K et al. (2007) Extracting gene expression patterns and identifying co-expressed genes from microarray data reveals biologically responsive processes. BMC Bioinformatics 8:427
Auman, J Todd; Chou, Jeff; Gerrish, Kevin et al. (2007) Identification of genes implicated in methapyrilene-induced hepatotoxicity by comparing differential gene expression in target and nontarget tissue. Environ Health Perspect 115:572-8
Auman, J Todd; Boorman, Gary A; Wilson, Ralph E et al. (2007) Heat map visualization of high-density clinical chemistry data. Physiol Genomics 31:352-6
Liu, Jie; Xie, Yaxiong; Ducharme, Danica M K et al. (2006) Global gene expression associated with hepatocarcinogenesis in adult male mice induced by in utero arsenic exposure. Environ Health Perspect 114:404-11
Liu, Jie; Xie, Yaxiong; Merrick, B Alex et al. (2006) Transplacental arsenic plus postnatal 12-O-teradecanoyl phorbol-13-acetate exposures associated with hepatocarcinogenesis induce similar aberrant gene expression patterns in male and female mouse liver. Toxicol Appl Pharmacol 213:216-23
Zhou, Tong; Chou, Jeff W; Simpson, Dennis A et al. (2006) Profiles of global gene expression in ionizing-radiation-damaged human diploid fibroblasts reveal synchronization behind the G1 checkpoint in a G0-like state of quiescence. Environ Health Perspect 114:553-9
Kim, Yongbaek; Ton, Thai-Vu; DeAngelo, Anthony B et al. (2006) Major carcinogenic pathways identified by gene expression analysis of peritoneal mesotheliomas following chemical treatment in F344 rats. Toxicol Appl Pharmacol 214:144-51

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