The goal of this proposal is further characterize the similarities and differences of two prenlytransferases, farnesyltransferase (FTase) and geranylgeranyltransferase type I (GGTaseI). In vivo, these enzymes are responsible for prenylating many protein substrates including Ras proteins. The discovery that prenylation was critical for the transforming abilities of oncogenic Ras proteins makes prenyltransferases a key target for anticancer therapeutics. In-depth information on the catalytic mechanisms of these proteins will aid in the development and refinement of substrate- based inhibitors. The transition-state for the reaction catalyzed by FTase has characteristics of both a nucleophilic and electrophilic mechanism. To distinguish between these mechanisms, transient heavy atom isotope effects will be studied. If a carbocation intermediate is relevant in the FTase mechanism, both primary and secondary isotope effects should be detected. This proposal will also investigate the role of pyrophosphate (PPi) release on the overall, steady-state kcat of the base reaction. This approach will involve the combination of site-directed mutagenesis and the implementation of an assay designed to measure PPi production directly. Finally, this proposal will investigate the metal coordination and catalytic mechanism of GGTase I for comparison to those features of the related FTase.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Postdoctoral Individual National Research Service Award (F32)
Project #
5F32CA084757-02
Application #
6377745
Study Section
Special Emphasis Panel (ZRG1-BIO (01))
Program Officer
Lohrey, Nancy
Project Start
2001-07-01
Project End
Budget Start
2001-07-01
Budget End
2002-06-30
Support Year
2
Fiscal Year
2001
Total Cost
$40,196
Indirect Cost
Name
University of Michigan Ann Arbor
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
791277940
City
Ann Arbor
State
MI
Country
United States
Zip Code
48109
Pais, June E; Bowers, Katherine E; Fierke, Carol A (2006) Measurement of the alpha-secondary kinetic isotope effect for the reaction catalyzed by mammalian protein farnesyltransferase. J Am Chem Soc 128:15086-7
Pais, June E; Bowers, Katherine E; Stoddard, Andrea K et al. (2005) A continuous fluorescent assay for protein prenyltransferases measuring diphosphate release. Anal Biochem 345:302-11
Bowers, Katherine E; Fierke, Carol A (2004) Positively charged side chains in protein farnesyltransferase enhance catalysis by stabilizing the formation of the diphosphate leaving group. Biochemistry 43:5256-65
Hartman, Heather L; Bowers, Katherine E; Fierke, Carol A (2004) Lysine beta311 of protein geranylgeranyltransferase type I partially replaces magnesium. J Biol Chem 279:30546-53
Pickett, Jennifer S; Bowers, Katherine E; Hartman, Heather L et al. (2003) Kinetic studies of protein farnesyltransferase mutants establish active substrate conformation. Biochemistry 42:9741-8
Pickett, Jennifer S; Bowers, Katherine E; Fierke, Carol A (2003) Mutagenesis studies of protein farnesyltransferase implicate aspartate beta 352 as a magnesium ligand. J Biol Chem 278:51243-50