The specific purpose of this proposal is to determine the three dimensional structure of cytochrome P450. Our broader research goals are directed at answering two specific questions: (1) How do electron transport enzymes catalyze the activation of 02 and H2O ligands, and (2) How are electrons transported between electron transport proteins? The primary tool to be used in these studies is protein x-ray crystallography though whenever necessary biochemical methods will be utilized to help answer questions raised by the x-ray structure. In addition to cytochrome P450 from pseudomonas putida which catalyzes the stereospecific hydroxylation of camphor, we are interested in two other Pseudomonas P450s which utilize a long chain alcohol, linalcol, and an aromatic molecule, paracymine. Structures of these enzymes and resulting comparative structural analyses will enable a detailed understanding regarding the question of substrate specificity of P450. The complete monoxygenase system consists of two additional electron transfer proteins, a flavo and an iron sulfur protein. Structures of these proteins will provide additional insights into how these proteins interact with one another to form intermolecular electron transfer complexes.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM033688-02
Application #
3283592
Study Section
Biophysics and Biophysical Chemistry B Study Section (BBCB)
Project Start
1985-03-01
Project End
1988-02-29
Budget Start
1986-03-01
Budget End
1987-02-28
Support Year
2
Fiscal Year
1986
Total Cost
Indirect Cost
Name
Genex Corporation
Department
Type
DUNS #
City
Gaithersburg
State
MD
Country
United States
Zip Code
20877
Kaur, Parminder; Chamberlin, A Richard; Poulos, Thomas L et al. (2016) Structure-Based Inhibitor Design for Evaluation of a CYP3A4 Pharmacophore Model. J Med Chem 59:4210-20
Poulos, Thomas L (2014) Heme enzyme structure and function. Chem Rev 114:3919-62
Sevrioukova, Irina F; Poulos, Thomas L (2014) Ritonavir analogues as a probe for deciphering the cytochrome P450 3A4 inhibitory mechanism. Curr Top Med Chem 14:1348-55
Madrona, Yarrow; Hollingsworth, Scott A; Tripathi, Sarvind et al. (2014) Crystal structure of cindoxin, the P450cin redox partner. Biochemistry 53:1435-46
Poulos, Thomas L; Madrona, Yarrow (2013) Oxygen activation and redox partner binding in cytochromes P450. Biotechnol Appl Biochem 60:128-33
Batabyal, Dipanwita; Poulos, Thomas L (2013) Crystal structures and functional characterization of wild-type CYP101D1 and its active site mutants. Biochemistry 52:8898-906
Sevrioukova, Irina F; Poulos, Thomas L (2013) Dissecting cytochrome P450 3A4-ligand interactions using ritonavir analogues. Biochemistry 52:4474-81
Sevrioukova, Irina F; Poulos, Thomas L (2013) Pyridine-substituted desoxyritonavir is a more potent inhibitor of cytochrome P450 3A4 than ritonavir. J Med Chem 56:3733-41
Madrona, Yarrow; Hollingsworth, Scott A; Khan, Bushra et al. (2013) P450cin active site water: implications for substrate binding and solvent accessibility. Biochemistry 52:5039-50
Sevrioukova, Irina F; Poulos, Thomas L (2013) Understanding the mechanism of cytochrome P450 3A4: recent advances and remaining problems. Dalton Trans 42:3116-26

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