Chlamydia species are important causes of disease for which no vaccine exists. A fundamental gap in our knowledge is how this obligate intracellular parasite establishes a privileged niche- a membrane bound compartment referred to as the ?inclusion?- in order to survive and replicate within the hostile intracellular environment. Chlamydiae encode a unique class secreted effectors, the Incs (inclusion membrane proteins), inserted directly into the inclusion membrane. Incs are ideally positioned to mediate interactions between the inclusion and the host, and are likely important for Chlamydia's intracellular survival. This grant builds on extensive preliminary studies in which we used large-scale affinity purification/mass spectrometry (AP-MS) to comprehensively identify protein-protein interactions (PPI) between all C. trachomatis Incs and the human proteome. Combined with rigorous bioinformatics analysis, this study identified ~350 high confidence Inc-host PPIs for 38/58 C. trachomatis Incs, representing one of the most comprehensive bacterial-host interactomes to date. Of high interest was the finding that CT192, an early expressed Inc of unknown function, exhibits high confidence interactions with all 11 known subunits of dynactin. This multi-subunit complex regulates the activity of the primary eukaryotic retrograde microtubule (MT)-motor, dynein. Dynactin, together with dynein and cargo adaptor proteins, plays critical roles in many cellular processes, including vesicle and organelle transport along MTs and tethering MTs to the centrosome. Both of these pathways are known to be involved in the C. trachomatis life cycle, and a chemically generated predicted CT192 null mutant exhibits a replication defect in cell culture. Using a combination of proteomic, biochemical, cell biological, and newly developed genetic strategies I will test the hypothesis that interaction between CT192 and dynactin is important for the intracellular life cycle of C. trachomatis.
In Aim 1, I will use a combination of proteomics and in vitro processivity assays to map the binding interface between CT192 and dynactin and determine how CT192 regulates dynactin activity, respectively.
In Aim 2, I will make use of newly pioneered genetic strategies to create a targeted insertional inactivation of CT192 in C. trachomatis and test the functional role of the CT192- dynactin interaction during infection, as well as determine whether CT192 is a virulence factor in a murine model of genital tract infection. Together these aims will allow me to understand how a Chlamydia effector contributes to the creation of a unique intracellular niche by reprogramming the host. Defining the interaction between CT192 and dynactin at the molecular level will contribute to the understanding of dynactin recruitment and regulation by C. trachomatis, and may provide new insights into dynactin function and regulation broadly applicable to human disease.

Public Health Relevance

Chlamydia species are obligate intracellular bacteria that are leading causes of ocular, genital, and respiratory infections in humans. This grant seeks to understand how the interaction between a C. trachomatis effector and a host protein complex contributes to the ability of Chlamydia to survive within the hostile intracellular environment. Defining this interaction will provide the opportunity to further our understanding of fundamental host cell biology, to identify new biology relevant to pathogenesis, and to uncover at the molecular level how pathogens subvert these processes.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Predoctoral Individual National Research Service Award (F31)
Project #
5F31AI133951-03
Application #
9749018
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Vincent, Leah Rebecca
Project Start
2017-09-01
Project End
2020-08-31
Budget Start
2019-09-01
Budget End
2020-08-31
Support Year
3
Fiscal Year
2019
Total Cost
Indirect Cost
Name
University of California San Francisco
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94118