The goal of this research is to understand the molecular interactions between rRNA and mRNA that are pertinent in selection in the A site.
Specific Aim 1 : Is the 16S ribosomal RNA triple mutant G530A, A1408C/G/L, and A1492G functionally comparable to wild type ribosomes? Specific Aim 2: What is the effect of interactions between C1054 and the base following UGA on release factor 2 selection. A literature survey of human genetic defects found that there are 179 unique nonsense mutations that result in disease (Atkinson, 1994). The effect of these mutations varies across a wide range including ovarian cancer, cystic fibrosis, and sex reversal. Understanding the mechanisms of selection will aid the development of drug and genetic therapies.
Taliaferro, Dwayne L; Farabaugh, Philip J (2007) Testing constraints on rRNA bases that make nonsequence-specific contacts with the codon-anticodon complex in the ribosomal A site. RNA 13:1279-86 |
Taliaferro, Dwayne; Farabaugh, Philip J (2007) An mRNA sequence derived from the yeast EST3 gene stimulates programmed +1 translational frameshifting. RNA 13:606-13 |