The RNA picornaviruses have become extraordinarily important and well studied models for experimental investigations into the molecular mechanisms of IRES-dependent translation, protein processing, viral RNA synthesis, virion assembly, virus-cell interactions and ultimately disease pathogenesis. Diverse cis-acting RNA elements, host protein requirements, antiviral drug sensitivity, and preferred polyprotein processing schemes suggest that core RNA replication pathways are not the same for all the members in this important family of viruses. The goal of the current project is to compare and contrast the requisite viral proteins, RNA binding steps and general processes of the cardiovirus RNA replication scheme with those from polio- and rhinoviruses and establish which of these steps are common and descriptive of the family as a whole. The effects of the inhibitory agent dipyridamole will be studied to establish the potential of this drug as an antiviral and as a research tool that can discriminate between translation and RNA replication. The regulatory role of cardioviral polyprotein precursors or processing intermediates in RNA synthesis will be established and compared to existing models for polio- and rhinoviruses. In order to catalogue the local structural components that contribute to cardiovirus specific template activity during RNA synthesis, the interaction between viral polymerase components and the 5' and 3' untranslated regions of the genome will be characterized.
These aims rely on existing reagents, assays, and technologies and their successful accomplishment is very likely to help establish new paradigms in the RNA replication field.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Postdoctoral Individual National Research Service Award (F32)
Project #
5F32GM069311-02
Application #
6773169
Study Section
Special Emphasis Panel (ZRG1-F08 (20))
Program Officer
Portnoy, Matthew
Project Start
2003-08-01
Project End
2005-07-31
Budget Start
2004-08-01
Budget End
2005-07-31
Support Year
2
Fiscal Year
2004
Total Cost
$47,296
Indirect Cost
Name
University of Wisconsin Madison
Department
Microbiology/Immun/Virology
Type
Other Domestic Higher Education
DUNS #
161202122
City
Madison
State
WI
Country
United States
Zip Code
53715
Fata-Hartley, Cori L; Palmenberg, Ann C (2005) Dipyridamole reversibly inhibits mengovirus RNA replication. J Virol 79:11062-70