The aim of the proposed research is to characterize the energetics of fragmentation of large multiprotein complexes. Several model systems, including the complexes of small heat shock protein, chaperonin GroEL, and transthyretin, will be studied. The excitation and subsequent dissociation of these systems will be achieved in a modified quadrupole time-of-flight (Q-TOF) mass spectrometer. This instrument allows ion activation by either surface induced dissociation (SID) or collision induced dissociation (CID) and will enable the comparison of these different techniques. The efficient transfer of kinetic to vibrational energy that is achieved via SID will allow the study of multiprotein complexes over a wide range of internal energies. Several factors that likely govern the dissociation of these complexes will be investigated, including activation energy, number and size of subunits in a complex (vibrational degrees of freedom), their interfacial surface area, and types of binding interactions (hydrophobic v. polar). In a broad sense, these studies are aimed to facilitate the development of mass spectrometric strategies for the structural characterization and eventual assignment of biological funtion of multiprotein complexes.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Postdoctoral Individual National Research Service Award (F32)
Project #
5F32GM075622-02
Application #
7174615
Study Section
Special Emphasis Panel (ZRG1-F04A (20))
Program Officer
Flicker, Paula F
Project Start
2006-01-23
Project End
2007-09-14
Budget Start
2007-01-23
Budget End
2007-09-14
Support Year
2
Fiscal Year
2007
Total Cost
$32,118
Indirect Cost
Name
University of Arizona
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
806345617
City
Tucson
State
AZ
Country
United States
Zip Code
85721
Beardsley, Richard L; Jones, Christopher M; Galhena, Asiri S et al. (2009) Noncovalent protein tetramers and pentamers with ""n"" charges yield monomers with n/4 and n/5 charges. Anal Chem 81:1347-56
Wysocki, Vicki H; Joyce, Karen E; Jones, Christopher M et al. (2008) Surface-induced dissociation of small molecules, peptides, and non-covalent protein complexes. J Am Soc Mass Spectrom 19:190-208
Jones, Christopher M; Beardsley, Richard L; Galhena, Asiri S et al. (2006) Symmetrical gas-phase dissociation of noncovalent protein complexes via surface collisions. J Am Chem Soc 128:15044-5