Folded polymers in Nature are made from relatively simple monomers, but they adopt complex foldedstructures through networks of non-covalent interactions. Nonnatural folded polymers, or foldamers, havethe potential for similar versatility. Control of foldamer structure is crucial if these molecules are to realizetheir full potential as tools in biology and medicine. beta-3-Peptides have been shown to form stable helices,even without cyclic constraints. The logical next step in the study of such foldamer structures is to search forbeta-3-peptides that can adopt well defined tertiary structures, such as helical bundles and coiled coils. Wehope to use screening methods to identify peptides that can form parallel or antiparallel helical dimers from alibrary of beta-3-peptides. These experiments will begin to establish the rules of higher order structureformation of beta-3-peptide foldamers and open the door to designing more complex structures.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Postdoctoral Individual National Research Service Award (F32)
Project #
5F32GM076820-03
Application #
7338322
Study Section
Special Emphasis Panel (ZRG1-F04B (20))
Program Officer
Flicker, Paula F
Project Start
2006-01-01
Project End
2008-07-01
Budget Start
2008-01-01
Budget End
2008-07-01
Support Year
3
Fiscal Year
2008
Total Cost
$27,898
Indirect Cost
Name
Yale University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
043207562
City
New Haven
State
CT
Country
United States
Zip Code
06520
Goodman, Jessica L; Petersson, E James; Daniels, Douglas S et al. (2007) Biophysical and structural characterization of a robust octameric beta-peptide bundle. J Am Chem Soc 129:14746-51
Qiu, Jade X; Petersson, E James; Matthews, Erin E et al. (2006) Toward beta-amino acid proteins: a cooperatively folded beta-peptide quaternary structure. J Am Chem Soc 128:11338-9