The goal of this research is to elucidate and characterize the mechanism of chromosome segregation during cell division in Caulobacter crescentus. Accumulating evidence suggests that many bacterial species, including Caulobacter crescentus, utilize DNA partitioning systems (Par systems) related to those found in plasmids to segregate portions of their chromosomes after DNA replication. Par systems are widespread and well studied in bacteria, yet the mechanism of DNA partitioning by these systems remains largely hypothetical. In this proposed research, both established and emerging technologies in cell biology will be utilized to examine the role and mechanism of the C. crescentus chromosomal Par system in the segregation of the C. crescentus chromosomal origin region. The structures and dynamic localization patterns of the two protein components of the Par system, the ATPase ParA and the DNA binding factor ParB, will be determined during chromosome segregation using timelapse and deconvolution fluorescence microscopy, and super- resolution PALM microscopy methods. The dynamics of ParA subunits within observed ParA structures will be examined using photobleaching/timelapse microscopy and single molecule tracking methods to directly test between predictions of various mechanistic models proposed for Par-induced segregation. Finally, the effect of mutating conserved ParA and ParB residues on DNA segregation will be determined to clarify the roles of the various molecular interactions in the chromosome segregation process. These experiments will lead to a complete mechanistic understanding of chromosome segregation by the C. crescentus Par system which will likely be applicable to both chromosomal and plasmid DNA segregation mechanisms in diverse bacterial species, Characterization of the DNA segregation mechanism in Caulobacter will undoubtedly elucidate novel targeting strategies for antibiotics that obstruct bacterial growth and inhibit the spread of drug-resistance between bacteria.

Public Health Relevance

The goal of this research is to understand how bacteria partition DNA to their progeny during cell division. This fundamental process is essential for bacterial growth and infection. The elucidation and characterization of the mechanism of bacterial DNA segregation will reveal novel strategies and targets for antibiotics that prevent bacterial growth and lead to new cures for bacterial infections.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Postdoctoral Individual National Research Service Award (F32)
Project #
5F32GM088966-02
Application #
7916670
Study Section
Special Emphasis Panel (ZRG1-F13-C (20))
Program Officer
Carter, Anthony D
Project Start
2009-08-01
Project End
2012-07-31
Budget Start
2010-08-01
Budget End
2011-07-31
Support Year
2
Fiscal Year
2010
Total Cost
$50,474
Indirect Cost
Name
Stanford University
Department
Anatomy/Cell Biology
Type
Schools of Medicine
DUNS #
009214214
City
Stanford
State
CA
Country
United States
Zip Code
94305
Ptacin, Jerod L; Gahlmann, Andreas; Bowman, Grant R et al. (2014) Bacterial scaffold directs pole-specific centromere segregation. Proc Natl Acad Sci U S A 111:E2046-55
Ptacin, Jerod L; Shapiro, Lucy (2013) Chromosome architecture is a key element of bacterial cellular organization. Cell Microbiol 15:45-52
Lew, Matthew D; Lee, Steven F; Ptacin, Jerod L et al. (2011) Three-dimensional superresolution colocalization of intracellular protein superstructures and the cell surface in live Caulobacter crescentus. Proc Natl Acad Sci U S A 108:E1102-10
Ptacin, Jerod L; Lee, Steven F; Garner, Ethan C et al. (2010) A spindle-like apparatus guides bacterial chromosome segregation. Nat Cell Biol 12:791-8
Ptacin, Jerod L; Shapiro, Lucy (2010) Initiating bacterial mitosis: understanding the mechanism of ParA-mediated chromosome segregation. Cell Cycle 9:4033-4