Dr. Annette Molinaro is an Assistant Professor in the Division of Biostatistics in the Department of Epidemiology and Public Health at Yale University School of Medicine. Prior to arriving at Yale, Dr. Molinaro was a Cancer Prevention Fellow at the National Cancer Institute. Her long term career goal is to develop statistical and computational methods which elucidate mechanisms of cancer pathogenesis to be used for the purposes of cancer prevention, diagnosis, and treatment. To reach this goal she has outlined two areas which are in need of enhancement: 1) her knowledge of functional genomics specifically related to carcinogenesis; and, 2) her proficiency in computer programming for the purposes of searching for and extracting pertinent information from vast data structures. A comprehensive understanding of the biological mechanisms behind carcinogenesis as well as the advanced computational skills necessary to implement novel statistical methods will propel Dr. Molinaro's independent research program. To meet these needs, Dr. Molinaro will: 1) attend classes at Yale University in genomics, bioinformatics, computer science, and molecular biology; 2) participate in world renowned courses at the Jackson and Cold Spring Harbor Laboratories in mammalian genetics, computational and comparative genomics, and complex trait analysis; and, 3) attend scientific meetings and workshops to present her K22 research, build collaborations, and engage in scientific discussion on current issues concerning statistical genomics. Her proposed research project entails a comprehensive, aggressive search of genomic, epidemiologic, and histologic data for the purposes of predicting a clinical outcome of interest, such as time to recurrence or death. Dr. Molinaro has established a univariate approach to this problem; however, she now needs to expand this to a realistic biological setting. The primary aims of this research project are: 1) to account for missing values in the genomic variables; 2) evaluate measures of variable importance; and, 3) extend this approach to encompass other statistical models such as wavelets and splines. This K22 grant will enable Dr. Molinaro the protected time and resources to accomplish her training in the molecular biology of cancer, establish collaborations at Yale University and beyond, and provide the scientific community with a much needed tool for associating genomic data with clinical outcomes. Relevance: Dr. Molinaro's research incorporates genomic, histological, and epidemiological information in order to predict a clinical outcome, such as time to disease progression. It is methods such as this that will provide greater clarity within the complexity of carcinogenesis and allow for more targeted methods of cancer prevention and control. ? ? ?

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Career Transition Award (K22)
Project #
1K22CA123146-01
Application #
7138117
Study Section
Subcommittee G - Education (NCI)
Program Officer
Jakowlew, Sonia B
Project Start
2006-07-06
Project End
2009-06-30
Budget Start
2006-07-06
Budget End
2007-06-30
Support Year
1
Fiscal Year
2006
Total Cost
$159,173
Indirect Cost
Name
Yale University
Department
Public Health & Prev Medicine
Type
Schools of Medicine
DUNS #
043207562
City
New Haven
State
CT
Country
United States
Zip Code
06520
Molinaro, Annette M; Carriero, Nicholas; Bjornson, Robert et al. (2011) Power of data mining methods to detect genetic associations and interactions. Hum Hered 72:85-97
Molinaro, Annette M; Lostritto, Karen; van der Laan, Mark (2010) partDSA: deletion/substitution/addition algorithm for partitioning the covariate space in prediction. Bioinformatics 26:1357-63
Koga, Yasuo; Pelizzola, Mattia; Cheng, Elaine et al. (2009) Genome-wide screen of promoter methylation identifies novel markers in melanoma. Genome Res 19:1462-70
Halaban, Ruth; Krauthammer, Michael; Pelizzola, Mattia et al. (2009) Integrative analysis of epigenetic modulation in melanoma cell response to decitabine: clinical implications. PLoS One 4:e4563
Pelizzola, Mattia; Koga, Yasuo; Urban, Alexander Eckehart et al. (2008) MEDME: an experimental and analytical methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment. Genome Res 18:1652-9
Giltnane, Jennifer M; Molinaro, Annette; Cheng, Huan et al. (2008) Comparison of quantitative immunofluorescence with conventional methods for HER2/neu testing with respect to response to trastuzumab therapy in metastatic breast cancer. Arch Pathol Lab Med 132:1635-47
Kluger, Harriet M; Siddiqui, Summar F; Angeletti, Cesar et al. (2008) Classification of renal cell carcinoma based on expression of VEGF and VEGF receptors in both tumor cells and endothelial cells. Lab Invest 88:962-72