The goal of this Shared Resource is to provide a value-added service to peer-reviewed cancer research studies involving the collection management and analysis of large amounts of complex and varied data. Many clinical and population studies include a variety of different types of data collections. The use of a sophisticated relational database will enable detailed management reports to be available to study leaders on demand. The appropriate use of such reports will significantly improve the quality of the study data by the early identification of missing data and the automatic scheduling of patients for study activities. In addition, the new array of technology that is rapidly being developed in basic science results in very large data collections which need sophisticated computing to maximize their utility to the researchers. This is expected to be a major developing area over the next period of the grant. The services provided by this Resource include: 1. The design and programming of relational databases for population and other large scale research studies. 2. The development and supervision of a sophisticated data communications system for research studies. 3. The development of new computer software to assist researchers in analyzing and interpreting sophisticated data generated from the new microarray and proteonics technologies. 4. The detection and analysis of correlations and patterns linking molecular observation with clinical parameters. This Resource has grown considerably in the last two years which has justified splitting it off from the Behavioral Assessment and Counseling Shared Resource. The service provided by the Resource has focused on very large projects that are acting as focal points and the underpinning for interactivity projects across the Center. Also, the need for computational software for analysis of array data is expected to increase dramatically in the next few years and the availability of a resource such as this is critical to the ability of UCSD Cancer Center scientists to optimize the value of this new technology. In the last year the Resource has been heavily utilized by the Cancer Prevention and Control Program. However, the rapid development of the array technology and the increase in clinical trials activity in the center indicates that this resource will be in major demand from the basic and clinical science programs.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
5P30CA023100-19
Application #
6599276
Study Section
Subcommittee G - Education (NCI)
Project Start
2002-06-11
Project End
2003-04-30
Budget Start
Budget End
Support Year
19
Fiscal Year
2002
Total Cost
$183,723
Indirect Cost
Name
University of California San Diego
Department
Type
DUNS #
077758407
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Jiang, Qingfei; Jamieson, Catriona (2018) BET'ing on Dual JAK/BET Inhibition as a Therapeutic Strategy for Myeloproliferative Neoplasms. Cancer Cell 33:3-5
Ramirez, Oscar; Aristizabal, Paula; Zaidi, Alia et al. (2018) Implementing a Childhood Cancer Outcomes Surveillance System Within a Population-Based Cancer Registry. J Glob Oncol :1-11
Liu, Liang; Yang, Lin; Yan, Wei et al. (2018) Chemotherapy Induces Breast Cancer Stemness in Association with Dysregulated Monocytosis. Clin Cancer Res 24:2370-2382
Lwin, Thinzar M; Murakami, Takashi; Miyake, Kentaro et al. (2018) Tumor-Specific Labeling of Pancreatic Cancer Using a Humanized Anti-CEA Antibody Conjugated to a Near-Infrared Fluorophore. Ann Surg Oncol 25:1079-1085
Singh, Siddharth; Loomba, Rohit (2018) Role of two-dimensional shear wave elastography in the assessment of chronic liver diseases. Hepatology 67:13-15
Hartman, Sheri J; Nelson, Sandahl H; Myers, Emily et al. (2018) Randomized controlled trial of increasing physical activity on objectively measured and self-reported cognitive functioning among breast cancer survivors: The memory & motion study. Cancer 124:192-202
Hoffmann, Hanne M; Gong, Ping; Tamrazian, Anika et al. (2018) Transcriptional interaction between cFOS and the homeodomain-binding transcription factor VAX1 on the GnRH promoter controls Gnrh1 expression levels in a GnRH neuron maturation specific manner. Mol Cell Endocrinol 461:143-154
Liu, Xuxiang; Cao, Minghui; Palomares, Melanie et al. (2018) Metastatic breast cancer cells overexpress and secrete miR-218 to regulate type I collagen deposition by osteoblasts. Breast Cancer Res 20:127
Huang, Justin K; Carlin, Daniel E; Yu, Michael Ku et al. (2018) Systematic Evaluation of Molecular Networks for Discovery of Disease Genes. Cell Syst 6:484-495.e5
Kalyanaraman, Hema; Schwaerzer, Gerburg; Ramdani, Ghania et al. (2018) Protein Kinase G Activation Reverses Oxidative Stress and Restores Osteoblast Function and Bone Formation in Male Mice With Type 1 Diabetes. Diabetes 67:607-623

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