The hydrophobic effect plays a critical role in many biological processes such as membrane formation, protein folding, protein interactions, ligand binding, and enzyme catalysis. Using a simplified model of water, the MB model, in Monte Carlo NPT simulations, we are examining the shape dependence of the hydrophobic effect. With this model, we can explore both the thermodynamic (including the heat capacity of transfer) and structural consequences of hydrophobic solvation. Specifically, we show that the MB model predicts a strong shape dependence of the hydrophobic effect, and that this arises from simple geometric restrictions on the hydrogen bonding of shell waters around a solute. This structural insight correlates with the solvent structure observed in protein crystallography and solution NMR experiments.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR001081-24
Application #
6456799
Study Section
Project Start
2001-07-01
Project End
2003-08-31
Budget Start
Budget End
Support Year
24
Fiscal Year
2001
Total Cost
$273,230
Indirect Cost
Name
University of California San Francisco
Department
Type
DUNS #
073133571
City
San Francisco
State
CA
Country
United States
Zip Code
94143
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