Preliminary studies have identified numerous mRNAs that may be under- or over-expressed in senescent human muscle relative to young adult muscle. The objective of the proposed research is to prospectively determine which of these transcripts are consistently affected by aging, and to further characterize these differences. Specifically, the relation between mRNA expression and protein expression will be examined in human muscle samples obtained from younger (18-29 yr) and older (65-79 yr) men and women. Because type 2 muscle fibers tend to atrophy more with age than type 1 fibers, the relative expression of these mRNAs in different fiber types will be determined. Many of the transcripts under-expressed in older muscle in the preliminary study encode mitochondrial proteins involved in electron transport and ATP synthesis. The roles of mitochondrial DNA copy number, mitochondrial transcription factor A, and nuclear respiratory factors in the under-expression of these mRNAs will be examined. Many of the transcripts differentially expressed in the preliminary study have been only partially sequenced. For those that are also differentially expressed in the prospective study, the full mRNA sequence will be determined. This information will be used to deduce the amino acid sequence, allowing studies of protein expression, and possibly providing clues about protein function. The knowledge generated by the proposed research may lead to a better understanding of the molecular basis of muscle atrophy and dysfunction in old age, and a better understanding of the basic biology of aging of postmitotic cells.

Agency
National Institute of Health (NIH)
Institute
National Institute on Aging (NIA)
Type
Research Project (R01)
Project #
5R01AG017891-04
Application #
6629883
Study Section
Geriatrics and Rehabilitation Medicine (GRM)
Program Officer
Dutta, Chhanda
Project Start
2000-04-15
Project End
2005-03-31
Budget Start
2003-04-01
Budget End
2005-03-31
Support Year
4
Fiscal Year
2003
Total Cost
$279,125
Indirect Cost
Name
University of Rochester
Department
Internal Medicine/Medicine
Type
Schools of Dentistry
DUNS #
041294109
City
Rochester
State
NY
Country
United States
Zip Code
14627
Welle, Stephen; Tawil, Rabi; Thornton, Charles A (2008) Sex-related differences in gene expression in human skeletal muscle. PLoS One 3:e1385
Welle, Stephen; Brooks, Andrew I; Delehanty, Joseph M et al. (2004) Skeletal muscle gene expression profiles in 20-29 year old and 65-71 year old women. Exp Gerontol 39:369-77
Welle, Stephen; Bhatt, Kirti; Shah, Bharati et al. (2003) Reduced amount of mitochondrial DNA in aged human muscle. J Appl Physiol 94:1479-84
Welle, Stephen; Brooks, Andrew I; Delehanty, Joseph M et al. (2003) Gene expression profile of aging in human muscle. Physiol Genomics 14:149-59
Welle, Stephen; Brooks, Andrew I; Thornton, Charles A (2002) Computational method for reducing variance with Affymetrix microarrays. BMC Bioinformatics 3:23
Welle, Stephen (2002) Gene transcript profiling in aging research. Exp Gerontol 37:583-90
Welle, Stephen (2002) Cellular and molecular basis of age-related sarcopenia. Can J Appl Physiol 27:19-41
Welle, Stephen; Bhatt, Kirti; Shah, Bharati et al. (2002) Insulin-like growth factor-1 and myostatin mRNA expression in muscle: comparison between 62-77 and 21-31 yr old men. Exp Gerontol 37:833-9
Welle, S; Brooks, A; Thornton, C A (2001) Senescence-related changes in gene expression in muscle: similarities and differences between mice and men. Physiol Genomics 5:67-73