This application is being submitted to PA-18-591 as a supplement to our current award R01AG051086. We seek to develop the resource beyond its core goal by testing miRNAs in the Induced Pluripotent Stem cells (also known as iPS cells or iPSCs) generated directly from adult cells of subjects with Alzheimer's disease (AD) or controls. AD is the most common cause of dementia in the elderly. Because current treatments provide modest symptomatic relief and do not slow AD progression, a better understanding of molecular bases of AD pathology is needed. This proposal will identify and validate microRNA (miRNA), a new class of drug targets. miRNA are endogenous, short, non-coding RNAs that generally inhibit protein expression by interacting with specific recognition elements of target transcripts. AD is believed to result from overproduction of amyloid-? peptide (A?), derived from A? precursor protein (APP), and dysregulation of proteins involved in A? production (e.g. APP, ?-secretase/BACE1) contributes to excess A? deposition. Therefore, we propose to study APP and BACE1 regulation using miRNA strategies. We hypothesize that specific miRNAs regulate endogenous levels of APP and BACE1, are dysfunctional in AD, and manipulation of these miRNAs will reduce A?.
Specific Aim 1 (SA1) will identify functional miRNA target sites in APP and BACE1 and validate miRNA post- transcriptional regulation of native APP and BACE1 expression. Rationale: Discover functional miRNA targets in UTRs of APP and BACE1 transcripts using iPS neuron cultures. Endpoints are APP and BACE1 mRNA & proteins, and A? peptides, which we predict to change with miRNA. Impact: Manipulation of miRNA regulation is a novel therapeutic approach and may be feasible for correcting gene dysregulation in AD. SA2 will test physiological interactions between miRNA validated in SA1 and their regulatory networks over APP and BACE1 expression. Rationale: Test other mechanisms of regulation that are likely linked to maintain homeostasis of APP and BACE1, and A?. Identifying roles of miRNA in this network is vital to pharmacologi- cally target miRNA-transcript interactions. Impact: Reveal novel mechanisms for miRNA function in AD. The major advantage of the proposal is that appropriate iPS cultures can be had from individuals who have i) autosomally dominant (familial) AD, ii) sporadic (apolipoprotein E ?4, associated) AD, and iii) age-matched non-AD controls. Comparison of effects from all three donor backgrounds would specifically elucidate differ- ences among specific rare and relatively more common forms of AD and both vs. normal individuals. All experi- ments in this proposed supplement fall fully within the scope of the original R01 grant application. Overall, the proposed novel research dictated by our central hypothesis is likely to have a significant para- digm shift on the field by elucidating novel regulatory mechanisms and identifying how specific miRNAs regu- late important gene products implicated in AD. The final impact will be in eventual use of these new drug tar- gets to produce therapeutic agents to slow or halt disease progression in AD.

Public Health Relevance

Alzheimer's disease (AD) is the most common cause of dementia in the elderly, but current treatments provide only modest symptomatic relief and do not slow disease progression, and a better understanding of molecular bases of AD pathology is needed. We propose to employ microRNA (miRNA) to study novel mechanisms that regulate amyloid-? (A?) precursor protein (APP) and ?-secretase (BACE1) as well as their associated pathways in the Induced Pluripotent Stem cells (also known as iPS cells or iPSCs) generated directly from adult cells of subjects with Alzheimer's disease (AD) or controls. The significance of this proposal is that miRNA regulation of APP represents a novel strategy to reduce toxic A? peptide levels and restore AD- associated dysregulation in the brain; the proposed work will identify and validate members of a new class of drug targets, and the impact of this work will be eventual use of these new drug targets to generate better therapeutic agents to slow or reverse disease progression in AD.

Agency
National Institute of Health (NIH)
Institute
National Institute on Aging (NIA)
Type
Research Project (R01)
Project #
3R01AG051086-04S1
Application #
9753474
Study Section
Program Officer
Miller, Marilyn
Project Start
2015-09-01
Project End
2020-04-30
Budget Start
2018-09-15
Budget End
2019-04-30
Support Year
4
Fiscal Year
2018
Total Cost
Indirect Cost
Name
Indiana University-Purdue University at Indianapolis
Department
Psychiatry
Type
Schools of Medicine
DUNS #
603007902
City
Indianapolis
State
IN
Country
United States
Zip Code
46202
Becker, Robert E; Greig, Nigel H; Lahiri, Debomoy K et al. (2018) (-)-Phenserine and Inhibiting Pre-Programmed Cell Death: In Pursuit of a Novel Intervention for Alzheimer's Disease. Curr Alzheimer Res 15:883-891
Konar, Arpita; Kumar, Ashish; Maloney, Bryan et al. (2018) A serine protease KLK8 emerges as a regulator of regulators in memory: Microtubule protein dependent neuronal morphology and PKA-CREB signaling. Sci Rep 8:9928
Decourt, Boris; Lahiri, Debomoy K; Sabbagh, Marwan N (2017) Targeting Tumor Necrosis Factor Alpha for Alzheimer's Disease. Curr Alzheimer Res 14:412-425
Lahiri, Debomoy K; Konar, Arpita; Thakur, Mahendra K et al. (2017) A cardinal sin when researching neuropsin/KLK8: Thou shalt validate antibodies. Alzheimers Dement 13:1068-1069
Bali, Parul; Lahiri, Debomoy K; Banik, Avijit et al. (2017) Potential for Stem Cells Therapy in Alzheimer's Disease: Do Neurotrophic Factors Play Critical Role? Curr Alzheimer Res 14:208-220
Shah, Kavita; Lahiri, Debomoy K (2017) A Tale of the Good and Bad: Remodeling of the Microtubule Network in the Brain by Cdk5. Mol Neurobiol 54:2255-2268
Nurnberger Jr, John I (2017) A Genetic Locus Associated With Depression: The Iceberg Begins to Melt. Biol Psychiatry 82:304-305
Erickson, Craig A; Ray, Balmiki; Wink, Logan K et al. (2017) Initial analysis of peripheral lymphocytic extracellular signal related kinase activation in autism. J Psychiatr Res 84:153-160
Lahiri, Debomoy K; Maloney, Bryan; Greig, Nigel H (2017) Are pulmonary fibrosis and Alzheimer's disease linked? Shared dysregulation of two miRNA species and downstream pathways accompany both disorders. J Biol Chem 292:20353
Srinivasan, Mythily; Lahiri, Debomoy K (2017) Glucocorticoid-Induced Leucine Zipper in Central Nervous System Health and Disease. Mol Neurobiol 54:8063-8070

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