Our objective is to elucidate the role of the interferon (IFN)-induced protein kinase in the actions which cloned and natural IFNs mediate on viral and host functions.
The specific aims are: (1) To attempt to further purify the IFN-induced protein kinase which catalyzes the phosphorylation of ribosome-associated protein P1 and the Alpha subunit of protein synthesis initiation factor eIF-2; the kinase activity copurifies with protein P1. Starting material may include cells grown in culture, animal tissue or host cells within which P1 cDNA is expressed. The purification scheme presently used may be modified to include affinity chromatography and/or preparative HPLC steps. We plan to continue our biochemical characterization of P1 preparations with emphasis on the following: the study of the possible role of mRNA secondary structure in kinase activation and translation inhibition; the examination of the mechanism and role of the inhibition of P1/eIF-2Alpha kinase activity by adenovirus VAI RNA; and the examination of the arrangement of P2 on the 4OS ribosomal subunit. (2) To attempt to construct and characterize a full-length cDNA copy of the mRNA endocing human protein P1. Protein P1 cDNA clones will be utilized in studies on the regulation of P1 expression in interferon-treated and virus-infected animal cells. We plan to attempt to obtain expressin of P1 in prokaryotic and eukaryotic cells after insertion of P1 cDNA into appropriate vectors as an approach to structural and functional analyses of P1. (3) To continue our analysis of the phosphorylation status of protein P1 and initiation factor eIF-2Alpha in intact cells in culture in the presence and absence of treatment with interferon and infectin with himan reovirus or adenovirus. Wild-type reovirus is IFN sensitive and activates the P1/eIF-2Alpha kinase, whereas wild-type adenovirus is relatively IFN-resistant and inhibits the kinase. These serotypes of reovirus will be examined which differ appreciably in their capacity to inhibit cellular protein synthesis, and wild type andd mutant strains of adenovirus will be studied which differ in their ability to produce VA RNA and synthesize late viral proteins. The effect of IFN type (Alpha, Gamma) and cell type (epithelial, fibroblast) will be examined. Two dimensional electrophoresis and immunoblot procedures will be used to quantitate P1 and eIF-2Alpha phosphorylation.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
5R01AI020611-05
Application #
3130380
Study Section
Experimental Virology Study Section (EVR)
Project Start
1983-12-01
Project End
1991-11-30
Budget Start
1987-12-01
Budget End
1988-11-30
Support Year
5
Fiscal Year
1988
Total Cost
Indirect Cost
Name
University of California Santa Barbara
Department
Type
Schools of Arts and Sciences
DUNS #
City
Santa Barbara
State
CA
Country
United States
Zip Code
93106
Ma, Dzwokai; George, Cyril X; Nomburg, Jason et al. (2017) Upon Infection the Cellular WD Repeat-containing Protein 5 (WDR5) Localizes to Cytoplasmic Inclusion Bodies and Enhances Measles Virus Replication. J Virol :
Kainulainen, Markus; Lau, Simone; Samuel, Charles E et al. (2016) NSs Virulence Factor of Rift Valley Fever Virus Engages the F-Box Proteins FBXW11 and ?-TRCP1 To Degrade the Antiviral Protein Kinase PKR. J Virol 90:6140-7
George, Cyril X; Ramaswami, Gokul; Li, Jin Billy et al. (2016) Editing of Cellular Self-RNAs by Adenosine Deaminase ADAR1 Suppresses Innate Immune Stress Responses. J Biol Chem 291:6158-68
George, Cyril X; Samuel, Charles E (2015) STAT2-dependent induction of RNA adenosine deaminase ADAR1 by type I interferon differs between mouse and human cells in the requirement for STAT1. Virology 485:363-70
Wu, Chengjun; Bai, Lufeng; Li, Zhiqun et al. (2015) Poor growth of human adenovirus-12 compared to adenovirus-2 correlates with a failure to impair PKR activation during the late phase of infection. Virology 475:120-8
Pfaller, Christian K; Mastorakos, George M; Matchett, William E et al. (2015) Measles Virus Defective Interfering RNAs Are Generated Frequently and Early in the Absence of C Protein and Can Be Destabilized by Adenosine Deaminase Acting on RNA-1-Like Hypermutations. J Virol 89:7735-47
Pfaller, Christian K; Radeke, Monte J; Cattaneo, Roberto et al. (2014) Measles virus C protein impairs production of defective copyback double-stranded viral RNA and activation of protein kinase R. J Virol 88:456-68
John, Lijo; Samuel, Charles E (2014) Induction of stress granules by interferon and down-regulation by the cellular RNA adenosine deaminase ADAR1. Virology 454-455:299-310
Okonski, Kristina M; Samuel, Charles E (2013) Stress granule formation induced by measles virus is protein kinase PKR dependent and impaired by RNA adenosine deaminase ADAR1. J Virol 87:756-66
Taghavi, Nora; Samuel, Charles E (2013) RNA-dependent protein kinase PKR and the Z-DNA binding orthologue PKZ differ in their capacity to mediate initiation factor eIF2?-dependent inhibition of protein synthesis and virus-induced stress granule formation. Virology 443:48-58

Showing the most recent 10 out of 111 publications