Phosphorylation of protein tyrosine residues is a cell's primary mechanism for propagating membrane receptor signals and for regulating cell growth and oncogenic transformation. A recently identified and growing family of protein tyrosine phosphatases, enzymes that specifically remove the phosphate moieties from phosphotyrosine- containing proteins, are essential for priming these signalling pathways and for controlling the levels of cell growth. Despite the centrality of these regulatory processes, no tertiary structures are known of any of the key enzymes. This proposal describes preliminary results and strategies to determine the X-ray crystal structure of a bacterial protein tyrosine phosphatase, with and without bound inhibitors and substrates, which will serve as a paradigm for understanding the enzyme's function and specificity. The pathogenic bacterium Yersinia is responsible for a range of human and rodent diseases from diarrhea to the bubonic plague. An essential determinant of its virulence is a secreted protein tyrosine phosphatase termed Yop51. Yop51 is likely a toxin which may enter host cells, interfere with immune cell phosphorylation levels and activation pathways, and allow Yersinia to subvert the host's immune system surveillance. The catalytic portion of this enzyme is highly homologous to human tyrosine phosphatases, has similar substrate specificity, and has an identical catalytic mechanism centered around an essential cysteine. Additionally, it can be expressed in large amounts for biochemical and structural studies. Large, well-diffracting crystals have been obtained of the apoenzyme. Data have been collected and a search for heavy atom derivatives is in progress. Diffracting crystals of the phosphatase complexed with the potent oxyanion inhibitor tungstate were also obtained and differ from the native. This structure may mimick the unique phosphocysteine enzyme transition state. In addition, procedures are described for crystallizing a phosphotyrosine peptide substrate bound to an enzyme variant incapable of substrate turnover. This will reveal how the enzyme catalyzes phosphate removal, why it is specific for phosphotyrosine, and how substrate-protein interactions define the enzyme's specificity.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
1R01AI034095-01
Application #
3149119
Study Section
Biophysical Chemistry Study Section (BBCB)
Project Start
1993-05-01
Project End
1997-04-30
Budget Start
1993-05-01
Budget End
1994-04-30
Support Year
1
Fiscal Year
1993
Total Cost
Indirect Cost
Name
University of Michigan Ann Arbor
Department
Type
Organized Research Units
DUNS #
791277940
City
Ann Arbor
State
MI
Country
United States
Zip Code
48109
Ivanov, Maya I; Stuckey, Jeanne A; Schubert, Heidi L et al. (2005) Two substrate-targeting sites in the Yersinia protein tyrosine phosphatase co-operate to promote bacterial virulence. Mol Microbiol 55:1346-56
Khandelwal, Purnima; Keliikuli, Kai; Smith, Craig L et al. (2002) Solution structure and phosphopeptide binding to the N-terminal domain of Yersinia YopH: comparison with a crystal structure. Biochemistry 41:11425-37
Khandelwal, P; Keliikuli, K; Smit, C L et al. (2001) 1H, 15N and 13C assignments of the N-terminal domain of Yersinia outer protein H in its apo form and in complex with a phosphotyrosine peptide. J Biomol NMR 21:69-70
Vijayalakshmi, J; Mukhergee, M K; Graumann, J et al. (2001) The 2.2 A crystal structure of Hsp33: a heat shock protein with redox-regulated chaperone activity. Structure 9:367-75
Fauman, E B; Cogswell, J P; Lovejoy, B et al. (1998) Crystal structure of the catalytic domain of the human cell cycle control phosphatase, Cdc25A. Cell 93:617-25
Denu, J M; Lohse, D L; Vijayalakshmi, J et al. (1996) Visualization of intermediate and transition-state structures in protein-tyrosine phosphatase catalysis. Proc Natl Acad Sci U S A 93:2493-8
Fauman, E B; Yuvaniyama, C; Schubert, H L et al. (1996) The X-ray crystal structures of Yersinia tyrosine phosphatase with bound tungstate and nitrate. Mechanistic implications. J Biol Chem 271:18780-8
Fauman, E B; Saper, M A (1996) Structure and function of the protein tyrosine phosphatases. Trends Biochem Sci 21:413-7
Yuvaniyama, J; Denu, J M; Dixon, J E et al. (1996) Crystal structure of the dual specificity protein phosphatase VHR. Science 272:1328-31
Schubert, H L; Fauman, E B; Stuckey, J A et al. (1995) A ligand-induced conformational change in the Yersinia protein tyrosine phosphatase. Protein Sci 4:1904-13