The immediate goal of this project is to identify and fully characterize the structure and function of aspartic proteinases found in the human malaria parasites, Plasmodium falciparum and Plasmodium vivax. Potential antimalarial drugs exist among inhibitors of these enzymes, and the long range goal is to develop a novel class of antimalarial drugs that function by inhibiting the aspartic proteinases of the parasite. These goals will be approached in this proposal by addressing the following specific aims: 1. Clone the genes encoding the aspartic proteinases of P. falciparum and P. vivax, utilizing the complete gene sequences available for plasmepsins I and II of P. falciparum and a recently cloned plasmepsin gene for P. vivax. 2. Characterize the in vivo expression and determine the size and subcellular location of the native aspartic proteinases of both parasite species. Oligonucleotide primers and probes specific for each gene will be used to estimate the steady-state level of mRNA accumulation in each erythrocytic stage. Polyclonal and monoclonal polypeptide-specific antibodies will be used to determine the size of native enzymes on western blots, and used to follow-intracellular synthesis, processing and translocation of the native enzymes in different stages of erythrocytic development via immunoelectron microscopy. Life cycle stages found in the mosquito vector will also be examined by immunoelectron microscopy for the presence of plasmepsins. Monoclonal antibodies will be used to purify the native forms of plasmepsins I and II from P. falciparum for comparative purposes. 3. Characterize the specificity of the malarial aspartic proteinases. Recombinant plasmepsins of P. falciparum and P. vivax will be refolded as necessary, and purified to homogeneity. The activity of each enzyme will be studied and compared to native enzymes from P. falciparum using a panel of oligopeptide substrates and inhibitors constructed for this purpose. These data will provide information on subsite interactions and will be interpreted by reference to a computer built molecular model of the structure of each enzyme, based on homology to structurally-defined proteinases. Site-directed mutagenesis will be used to test hypotheses concerning the critical residues within the active site in comparison to other aspartic proteinases. Protein will be provided to collaborating crystallographers for determination of the structure. Novel peptidomimetics will be constructed to provide possible ligands for crystallography as well as to test for in vivo function. Potential inhibitors will be tested in in vitro culture for antimalarial activity.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
5R01AI039211-04
Application #
2871540
Study Section
Tropical Medicine and Parasitology Study Section (TMP)
Program Officer
Gottlieb, Michael
Project Start
1996-02-01
Project End
2001-01-31
Budget Start
1999-02-01
Budget End
2001-01-31
Support Year
4
Fiscal Year
1999
Total Cost
Indirect Cost
Name
University of Florida
Department
Pathology
Type
Schools of Veterinary Medicine
DUNS #
073130411
City
Gainesville
State
FL
Country
United States
Zip Code
32611
Liu, Peng; Robbins, Arthur H; Marzahn, Melissa R et al. (2015) Enzymatic Characterization of Recombinant Food Vacuole Plasmepsin 4 from the Rodent Malaria Parasite Plasmodium berghei. PLoS One 10:e0141758
Liu, Peng; Marzahn, Melissa R; Robbins, Arthur H et al. (2009) Recombinant plasmepsin 1 from the human malaria parasite plasmodium falciparum: enzymatic characterization, active site inhibitor design, and structural analysis. Biochemistry 48:4086-99
Janka, Linda; Clemente, Jose; Vaiana, N et al. (2008) Targeting the plasmepsin 4 orthologs of Plasmodium sp. with ""double drug"" inhibitors. Protein Pept Lett 15:868-73
Moose, Rebecca E; Clemente, Jose C; Jackson, Larry R et al. (2007) Analysis of binding interactions of pepsin inhibitor-3 to mammalian and malarial aspartic proteases. Biochemistry 46:14198-205
Clemente, Jose C; Govindasamy, Lakshmanan; Madabushi, Amrita et al. (2006) Structure of the aspartic protease plasmepsin 4 from the malarial parasite Plasmodium malariae bound to an allophenylnorstatine-based inhibitor. Acta Crystallogr D Biol Crystallogr 62:246-52
Beyer, Bret B; Johnson, Jodie V; Chung, Alfred Y et al. (2005) Active-site specificity of digestive aspartic peptidases from the four species of Plasmodium that infect humans using chromogenic combinatorial peptide libraries. Biochemistry 44:1768-79
Madabushi, Amrita; Chakraborty, Sibani; Fisher, S Zoe et al. (2005) Crystallization and preliminary X-ray analysis of the aspartic protease plasmepsin 4 from the malarial parasite Plasmodium malariae. Acta Crystallogr Sect F Struct Biol Cryst Commun 61:228-31
Wlodawer, Alexander; Li, Mi; Gustchina, Alla et al. (2004) Two inhibitor molecules bound in the active site of Pseudomonas sedolisin: a model for the bi-product complex following cleavage of a peptide substrate. Biochem Biophys Res Commun 314:638-45
Li, Tang; Yowell, Charles A; Beyer, Bret B et al. (2004) Recombinant expression and enzymatic subsite characterization of plasmepsin 4 from the four Plasmodium species infecting man. Mol Biochem Parasitol 135:101-9
Omara-Opyene, A Levi; Moura, Pedro A; Sulsona, Carlos R et al. (2004) Genetic disruption of the Plasmodium falciparum digestive vacuole plasmepsins demonstrates their functional redundancy. J Biol Chem 279:54088-96

Showing the most recent 10 out of 19 publications