Adenoviruses (Ads) are common human viruses that cause mainly respiratory infections, as well as gastrointestinal infections and severe ocular infections. Modified forms of adenovirus have shown great potential for gene delivery and vector-based vaccination strategies. Ads provide numerous advantages for vector design including a broad host range, the ability to infect both replicative and non-replicative cells, and the fact that they do not integrate into the host chromosome so they do not inactivate genes or activate oncogenes. Understanding the underlying cell entry mechanism and tissue specificity of Ad is critical for engineering improved vectors. A key aspect of this proposal is its collaborative approach with an established adenovirologist to correlate structural findings with functional analyses. Cryo-electron microscopy (cryoEM) offers a powerful way to visualize Ad and Ad complexes with host factors including key antimicrobial peptides.
The specific aims of this proposal are to 1) determine a subnanometer (6-7?) resolution cryoEM structure of the complex of HD5 with a chimeric species B/C Ad vector, Ad35F, and 2) determine a subnanometer (6-7?) resolution cryoEM structure of the complex of HD5 with a chimeric species C/D Ad vector. Defensins are immune peptides that present the first line of defense against invading microbes. Understanding the molecular principles of this natural defense mechanism could lead to novel strategies for antiviral drug design.

Public Health Relevance

Adenovirus is a common human pathogen that causes respiratory infections, as well as gastrointestinal infections and severe ocular infections. Modified forms of adenovirus have shown great potential for gene delivery and vector-based vaccination strategies. Understanding Adenovirus structure, cell entry, and interaction with host factors will ultimately help guide the development of new antiviral agents. PHS 398/2590 (Rev. 11/07) Page 6 Continuation Format Page

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
2R01AI042929-12A1
Application #
7731901
Study Section
Virology - A Study Section (VIRA)
Program Officer
Park, Eun-Chung
Project Start
1997-08-01
Project End
2011-08-31
Budget Start
2009-09-17
Budget End
2010-08-31
Support Year
12
Fiscal Year
2009
Total Cost
$387,500
Indirect Cost
Name
Vanderbilt University Medical Center
Department
Physiology
Type
Schools of Medicine
DUNS #
004413456
City
Nashville
State
TN
Country
United States
Zip Code
37212
Flatt, Justin W; Kim, Robert; Smith, Jason G et al. (2013) An intrinsically disordered region of the adenovirus capsid is implicated in neutralization by human alpha defensin 5. PLoS One 8:e61571
Nemerow, Glen R; Stewart, Phoebe L; Reddy, Vijay S (2012) Structure of human adenovirus. Curr Opin Virol 2:115-21
Woetzel, Nils; Lindert, Steffen; Stewart, Phoebe L et al. (2011) BCL::EM-Fit: rigid body fitting of atomic structures into density maps using geometric hashing and real space refinement. J Struct Biol 175:264-76
Reddy, Vijay S; Natchiar, S Kundhavai; Stewart, Phoebe L et al. (2010) Crystal structure of human adenovirus at 3.5 A resolution. Science 329:1071-5
Smith, Jason G; Silvestry, Mariena; Lindert, Steffen et al. (2010) Insight into the mechanisms of adenovirus capsid disassembly from studies of defensin neutralization. PLoS Pathog 6:e1000959
Lindert, Steffen; Stewart, Phoebe L; Meiler, Jens (2009) Hybrid approaches: applying computational methods in cryo-electron microscopy. Curr Opin Struct Biol 19:218-25
Lindert, Steffen; Staritzbichler, René; Wötzel, Nils et al. (2009) EM-fold: De novo folding of alpha-helical proteins guided by intermediate-resolution electron microscopy density maps. Structure 17:990-1003
Silvestry, Mariena; Lindert, Steffen; Smith, Jason G et al. (2009) Cryo-electron microscopy structure of adenovirus type 2 temperature-sensitive mutant 1 reveals insight into the cell entry defect. J Virol 83:7375-83
Nemerow, G R; Pache, L; Reddy, V et al. (2009) Insights into adenovirus host cell interactions from structural studies. Virology 384:380-8
Lindert, Steffen; Silvestry, Mariena; Mullen, Tina-Marie et al. (2009) Cryo-electron microscopy structure of an adenovirus-integrin complex indicates conformational changes in both penton base and integrin. J Virol 83:11491-501

Showing the most recent 10 out of 15 publications