Helminthic infections are major public health concerns in both tropical and temperate areas of the world. Exciting new evidence suggests that genetic factors may play important roles in determining susceptibility to infection for a number of these diseases. This project proposes a genomic scan to detect and localize the specific genes that influence susceptibility to infection with hookworm, roundworm, and whipworm in 1205 individuals belonging to the single largest pedigree of the Jirel population of eastern Nepal. Building upon 15 years of genetic research with the Jirel population, including three years of research on the genetic epidemiology of intestinal worm infections, this project will utilize the outstanding existing database and resource of helminthic infection data, blood samples, and pedigree information, to perform the first large-scale genomic scan for genes influencing susceptibility to these important diseases. We will use automated genotyping techniques to place STR markers every 10cM across the genome. We will then use state-of-the-art linkage analysis methods to detect genes influencing quantitative phenotypes associated with helminthic infection including initial egg counts and worm counts determined from stool samples collected for 96 hours following treatment with albendazole for hookworm, roundworm and whipworm. These helminthic infection phenotypes were determined at two points in time, in an initial survey and in a follow-up sample from 1 year after the initial survey. This project will provide new information about the genetic determinants of susceptibility to intestinal worm infections.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
5R01AI044406-02
Application #
6374039
Study Section
Special Emphasis Panel (ZRG1-SSS-K (03))
Program Officer
Higgs, Elizabeth S
Project Start
2000-08-01
Project End
2004-07-31
Budget Start
2001-08-01
Budget End
2002-07-31
Support Year
2
Fiscal Year
2001
Total Cost
$586,628
Indirect Cost
Name
Southwest Foundation for Biomedical Research
Department
Type
DUNS #
City
San Antonio
State
TX
Country
United States
Zip Code
78245
Williams, Kimberly D; Subedi, Janardan; Jha, Bharat et al. (2016) Quantitative physical activity assessment of children and adolescents in a rural population from Eastern Nepal. Am J Hum Biol 28:129-37
Williams, K D; Blangero, J; Mahaney, M C et al. (2015) Axial quantitative ultrasound assessment of pediatric bone quality in eastern Nepal. Osteoporos Int 26:2319-28
Williams, Kimberly D; Blangero, John; Subedi, Janardan et al. (2013) Nonsyndromic brachydactyly type D and type E mapped to 7p15 in healthy children and adults from the Jirel ethnic group in eastern Nepal. Am J Hum Biol 25:743-50
Williams-Blangero, Sarah; Criscione, Charles D; VandeBerg, John L et al. (2012) Host genetics and population structure effects on parasitic disease. Philos Trans R Soc Lond B Biol Sci 367:887-94
Williams, Kimberly D; Nahhas, Ramzi W; Cottom, Carol R et al. (2012) Evaluation of qualitative methods for phenotyping brachymesophalangia-V from radiographs of children. Am J Hum Biol 24:68-73