This project is responsive to the Program Announcement # PA-98-011 """"""""Impact of HIV Variation on Immunological Recognition."""""""" The aim of this proposal is to investigate cross clade HIV specific CTL responses. Stimulation of a broad cross clade reactive HIV specific CTL response is considered crucial for a successful HIV vaccine. The high degree of sequence variation is a prominent feature of HIV infection, and a major impediment to vaccine development. However, very little information is known about HIV specific CTL responses in international populations of diverse HLA types, infected with HIV clade variants. Through our collaborators, we have access to PBMC samples from HIV infected individuals in Africa, China, South America and Thailand infected with HIV-1 and HIV-2. In the first specific aim, we will determine whether cross-reactive CTL epitopes exist in diverse populations infected with different clades of HIV-1. We will measure cross reactive CTL responses with a sensitive ELISPOT assay, using both a panel of clade specific recombinant vaccinia viruses expressing HIV-1 gene products from env, gag, p01 and nef, and clade specific peptides. Bulk culture CTL responses will be generated with polyclonal and antigen specific restimulation and tested on autologous or matched B lymphoblastoid cell targets with clade specific antigens. We will correlate CTL frequency with plasma load of viral RNA for all clades and assess whether amino acid changes in optimally defined minimal epitopes can make HIV CTL epitopes more cross reactive. In the second specific aim, we will ascertain whether infection with HlV~2 stimulates CTL which cross react with HIV-1 or vice versa, and whether some individuals are protected by one clade of HIV-1 against super-infection with another.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
5R01AI046254-05
Application #
6534202
Study Section
Special Emphasis Panel (ZRG1-VACC (01))
Program Officer
Ahlers, Jeffrey D
Project Start
1999-09-30
Project End
2004-06-30
Budget Start
2002-09-01
Budget End
2003-06-30
Support Year
5
Fiscal Year
2002
Total Cost
$260,036
Indirect Cost
Name
J. David Gladstone Institutes
Department
Type
DUNS #
047120084
City
San Francisco
State
CA
Country
United States
Zip Code
94158
Meiklejohn, Duncan A; Karlsson, R Karl; Karlsson, Annika C et al. (2004) ELISPOT cell rescue. J Immunol Methods 288:135-47
Karlsson, Annika C; Martin, Jeffrey N; Younger, Sophie R et al. (2003) Comparison of the ELISPOT and cytokine flow cytometry assays for the enumeration of antigen-specific T cells. J Immunol Methods 283:141-53
Karlsson, Annika C; Deeks, Steven G; Barbour, Jason D et al. (2003) Dual pressure from antiretroviral therapy and cell-mediated immune response on the human immunodeficiency virus type 1 protease gene. J Virol 77:6743-52
Jennes, Wim; Kestens, Luc; Nixon, Douglas F et al. (2002) Enhanced ELISPOT detection of antigen-specific T cell responses from cryopreserved specimens with addition of both IL-7 and IL-15--the Amplispot assay. J Immunol Methods 270:99-108
Jones, G J; Watera, C; Patterson, S et al. (2001) Comparative loss and maturation of peripheral blood dendritic cell subpopulations in African and non-African HIV-1-infected patients. AIDS 15:1657-63
McDermott, A B; Spiegel, H M; Irsch, J et al. (2001) A simple and rapid magnetic bead separation technique for the isolation of tetramer-positive virus-specific CD8 T cells. AIDS 15:810-2