All bacteria possess a single methionine aminopeptidase (MetAP) that is absolutely essential for cell survival. In contrast, eukaryotic cells express two MetAP enzymes and can survive if one of them is eliminated by genetics or inhibition. This enzyme is therefore a potentially attractive target for novel broad- spectrum antibacterial compounds. This key enzyme catalyzes the removal of N-terminal methionine from newly synthesized proteins and requires a divalent metal ion such as Mn(ll), Fe(ll), Co(ll), Ni(ll) orZn(ll) for activity. However, it is currently unclear which of these ions are the most important in vivo. Because most MetAP inhibitors have been discovered and characterized on the Co(ll) enzyme, they may not inhibit other metalloforms of MetAP. The objectives of this proposal are (1) to define the in vivo relevant metalloform of MetAP in E. coli and (2) to identify metalloform-selective MetAP inhibitors as both research tools and leads for drug development. We expect to obtain MetAP inhibitors that are highly selective for each of the relevant metalloforms. These unique inhibitors will be used to identify the in vivo metal utilized by MetAP in E. coli. The successful completion of this research will help to clarify the in vivo metal for MetAP and providenon- peptidic MetAP inhibitors as leads for effective antibacterial agents to treat infectious diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
5R01AI065898-05
Application #
7384483
Study Section
Special Emphasis Panel (ZRG1-DDR (01))
Program Officer
Xu, Zuoyu
Project Start
2005-07-01
Project End
2010-03-31
Budget Start
2008-04-01
Budget End
2009-03-31
Support Year
5
Fiscal Year
2008
Total Cost
$351,428
Indirect Cost
Name
Indiana University-Purdue University at Indianapolis
Department
Biochemistry
Type
Schools of Medicine
DUNS #
603007902
City
Indianapolis
State
IN
Country
United States
Zip Code
46202
Xu, Wei; Lu, Jing-Ping; Ye, Qi-Zhuang (2012) Structural analysis of bengamide derivatives as inhibitors of methionine aminopeptidases. J Med Chem 55:8021-7
Lu, Jing-Ping; Yuan, Xiu-Hua; Ye, Qi-Zhuang (2012) Structural analysis of inhibition of Mycobacterium tuberculosis methionine aminopeptidase by bengamide derivatives. Eur J Med Chem 47:479-84
Zhang, Qi; Ding, Derong; Zeng, Shelya X et al. (2012) Structure and activity analysis of Inauhzin analogs as novel antitumor compounds that induce p53 and inhibit cell growth. PLoS One 7:e46294
Lu, Jing-Ping; Yuan, Xiu-Hua; Yuan, Hai et al. (2011) Inhibition of Mycobacterium tuberculosis methionine aminopeptidases by bengamide derivatives. ChemMedChem 6:1041-8
Wang, Wen-Long; Chai, Sergio C; Ye, Qi-Zhuang (2011) Synthesis and biological evaluation of salicylate-based compounds as a novel class of methionine aminopeptidase inhibitors. Bioorg Med Chem Lett 21:7151-4
Chai, Sergio C; Wang, Wen-Long; Ding, De-Rong et al. (2011) Growth inhibition of Escherichia coli and methicillin-resistant Staphylococcus aureus by targeting cellular methionine aminopeptidase. Eur J Med Chem 46:3537-40
Yuan, Hai; Chai, Sergio C; Lam, Christopher K et al. (2011) Two methionine aminopeptidases from Acinetobacter baumannii are functional enzymes. Bioorg Med Chem Lett 21:3395-8
Lu, Jing-Ping; Ye, Qi-Zhuang (2010) Expression and characterization of Mycobacterium tuberculosis methionine aminopeptidase type 1a. Bioorg Med Chem Lett 20:2776-9
Lu, Jing-Ping; Chai, Sergio C; Ye, Qi-Zhuang (2010) Catalysis and inhibition of Mycobacterium tuberculosis methionine aminopeptidase. J Med Chem 53:1329-37
Chai, Sergio C; Ye, Qi-Zhuang (2010) A cell-based assay that targets methionine aminopeptidase in a physiologically relevant environment. Bioorg Med Chem Lett 20:2129-32

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