The use of group testing in prevalence estimation and disease detection is pervasive because of its time and cost savings. In such settings, human subjects are tested in groups, instead of individually, by pooling individual samples (e.g. blood samples) to determine the presence or absence of a disease. Examples where group testing currently is used include disease prevalence estimation in least developed countries, chlamydia and gonorrhea testing at public health clinics, and blood bank screening worldwide. Until recently, all biomedical applications using group testing have treated human subjects as being sampled from one homogenous population. Treating populations as heterogenous by incorporating covariates through modeling is new. Our """"""""informative group testing"""""""" research amplifies the original benefits from group testing by more efficiently detecting which individuals are infected and estimating the prevalence among specific parts of a population. This research involves developing new biostatistical methodology for modeling and for identifying the outcomes of unobserved correlated binary random variables.
The specific aims of this research are to (1) develop new methods for disease detection of a single disease through the use of group testing regression models, (2) formulate new modeling and estimation procedures to simultaneously model multiple disease probabilities, (3) create new multiple disease identification procedures using the multiple disease probability models, and (4) investigate biomedical data from a variety of settings to test our statistical procedures. Our informative group testing research will provide methods to more efficiently detect disease and estimate its prevalence. The public health community will benefit from these new methods through quicker and less costly disease detection and understanding which factors are associated with multiple diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
5R01AI067373-03
Application #
7674780
Study Section
Biostatistical Methods and Research Design Study Section (BMRD)
Program Officer
Beanan, Maureen J
Project Start
2007-09-25
Project End
2011-08-31
Budget Start
2009-09-01
Budget End
2011-08-31
Support Year
3
Fiscal Year
2009
Total Cost
$242,786
Indirect Cost
Name
University of Nebraska Lincoln
Department
Biostatistics & Other Math Sci
Type
Schools of Arts and Sciences
DUNS #
555456995
City
Lincoln
State
NE
Country
United States
Zip Code
68588
Black, Michael S; Bilder, Christopher R; Tebbs, Joshua M (2015) Optimal retesting configurations for hierarchical group testing. J R Stat Soc Ser C Appl Stat 64:693-710
Zhang, Boan; Bilder, Christopher R; Tebbs, Joshua M (2013) Regression analysis for multiple-disease group testing data. Stat Med 32:4954-66
McMahan, Christopher S; Tebbs, Joshua M; Bilder, Christopher R (2013) Regression models for group testing data with pool dilution effects. Biostatistics 14:284-98
Zhang, Boan; Bilder, Christopher R; Tebbs, Joshua M (2013) Group testing regression model estimation when case identification is a goal. Biom J 55:173-89
Tebbs, Joshua M; McMahan, Christopher S; Bilder, Christopher R (2013) Two-stage hierarchical group testing for multiple infections with application to the infertility prevention project. Biometrics 69:1064-73
Bilder, Christopher R; Tebbs, Joshua M (2012) Pooled-testing procedures for screening high volume clinical specimens in heterogeneous populations. Stat Med 31:3261-8
McMahan, Christopher S; Tebbs, Joshua M; Bilder, Christopher R (2012) Two-dimensional informative array testing. Biometrics 68:793-804
McMahan, Christopher S; Tebbs, Joshua M; Bilder, Christopher R (2012) Informative Dorfman screening. Biometrics 68:287-96
Black, Michael S; Bilder, Christopher R; Tebbs, Joshua M (2012) Group testing in heterogeneous populations by using halving algorithms. J R Stat Soc Ser C Appl Stat 61:277-290
Pritchard, Nicholas A; Tebbs, Joshua M (2011) Estimating Disease Prevalence Using Inverse Binomial Pooled Testing. J Agric Biol Environ Stat 16:70-87

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