The emergence of multi-drug resistant Gram-negative pathogens (especially Pseudomonas aeruginosa, Klebsiella pneumoniae, Acinetobacter baumannii, and the Enterobacteriaceae) represents the most serious challenge faced by infectious disease clinicians today. This situation highlights the urgent need for new therapeutics and innovative new therapeutic approaches to successfully treat these infections. In the initial period of this R01 project, we developed a novel small-molecule approach for the Fe2+-dependent delivery of diverse drug (or reporter) payloads. This platform has now been well validated in cells and in mouse models of malaria and cancer. In the next period of the project, we will apply and optimize this strategy to target important Gm-negative ?ESKAPE? pathogens. Our hypothesis is that host-pathogen interactions resulting from competition for iron resources present multiple opportunities for intervention with Fe2+-targeted antibiotics. The various iron acquisition strategies employed by P. aeruginosa alone predict for targetable pools of labile Fe2+ in the extracellular, periplasmic, and cytoplasmic compartments, depending on disease state and site of infection. Our research plan calls for the synthesis of Fe2+-targeted antibiotic conjugates designed to passively (Aim 1) or actively (via siderophore-mediated uptake;
Aim 2), transit Gm-negative membranes, and release compartment- appropriate antibiotic payloads following reaction with Fe2+. To study and verify their modes of transport and activation, we will employ non-Fe2+ reactive control conjugates, and a carefully selected panel of wild-type and mutant strains with altered permeability, efflux pump/porin expression, or siderophore/transporter expression. Susceptibility (MIC) testing will be performed under iron depleted and iron replete conditions using disease- relevant, context specific, iron sources to mimic the microenvironment of the host-pathogen interaction around iron. The most effective conjugates will be evaluated against a panel of Gm-negative clinical isolates obtained from diverse infection sites and disease states. These studies will provide new insights into the iron acquisition pathways of Gm-negative bacteria, and will inform the selection of promising leads for further study in murine infection models. Finally, to exploit the extracellular Fe2+ produced during P. aeruginosa biofilm formation, we will synthesize and characterize the first Fe2+-sensitive ?smart? materials (Aim 3). Used as coatings on indwelling devices, these novel materials would detect biofilm formation in situ and deliver antibiotics exactly where and when they are needed. In summary, this project will apply the insights and chemical strategies developed during the initial R01 period to a new therapeutic area, with the aim of introducing several new innovations to the field of antibacterial therapy.

Public Health Relevance

Infections caused by gram-negative bacteria have become a major health concern as these bacteria have become resistant to nearly all existing antibiotics. The problem is particularly serious in hospitals, where especially dangerous bacteria can persist and readily infect patients with weakened immune systems, and those undergoing surgical procedures. The current situation calls for the exploration of new approaches that better target these bacteria with existing and new drugs. In this research proposal, we will take the first steps towards developing a new class of drugs that target antibiotics specifically to site(s) of infection in a patient. To do this, these new molecules will exploit a ?tug-of-war? that occurs when bacteria compete for crucial iron resources with a patient?s own cells and tissues.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
2R01AI105106-06A1
Application #
9662112
Study Section
Macromolecular Structure and Function A Study Section (MSFA)
Program Officer
Xu, Zuoyu
Project Start
2013-05-29
Project End
2023-08-31
Budget Start
2018-09-14
Budget End
2019-08-31
Support Year
6
Fiscal Year
2018
Total Cost
Indirect Cost
Name
University of California San Francisco
Department
Pharmacology
Type
Schools of Pharmacy
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94118
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Aron, Allegra T; Heffern, Marie C; Lonergan, Zachery R et al. (2017) In vivo bioluminescence imaging of labile iron accumulation in a murine model of Acinetobacter baumannii infection. Proc Natl Acad Sci U S A 114:12669-12674
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Li, Hao; O'Donoghue, Anthony J; van der Linden, Wouter A et al. (2016) Structure- and function-based design of Plasmodium-selective proteasome inhibitors. Nature 530:233-6
Spangler, Benjamin; Fontaine, Shaun D; Shi, Yihui et al. (2016) A Novel Tumor-Activated Prodrug Strategy Targeting Ferrous Iron Is Effective in Multiple Preclinical Cancer Models. J Med Chem 59:11161-11170
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Fontaine, Shaun D; DiPasquale, Antonio G; Renslo, Adam R (2014) Efficient and stereocontrolled synthesis of 1,2,4-trioxolanes useful for ferrous iron-dependent drug delivery. Org Lett 16:5776-9

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