One-third of women in the U.S. have bacterial vaginosis (BV), a condition associated with greater risks of reproductive tract infections and preterm birth. BV is characterized by loss of lactobacilli and polymicrobial overgrowth of diverse potential pathogens, including Gardnerella vaginalis. Vaginal sialidase activity is found in nearly all women with BV and is independently associated with adverse outcomes. However, little is known regarding how sialidase supports dysbiosis and disease. This proposal examines how the sialidase produced by certain subtypes of G. vaginalis participates in the molecular pathogenesis of vaginal and intrauterine infection and encourages overgrowth of diverse BV bacteria. We have identified the genetic basis of G.v. sialidase activity and found that 80% of BV cases have G.v. encoding the sialidase genes nanH2 or nanH3, and 80% of women with nanH2-positive or H3-positive vaginal microbiota have BV. Our data suggests that G.v. sialidase fundamentally transforms the cellular glycan landscape in BV and shows that glycan degradation encourages pathogen colonization. In three specific aims, this proposal will use human vaginal samples, diverse G.v. isolates, a mouse model that replicates relevant features of BV, new wild-type and paired nanH3 mutant G.v. strains, and novel ex vivo models employing native human vaginal communities to test several hypotheses about the molecular mechanism of G. vaginalis sialidase in the causes and complications of BV.
In Aim 1, we will examine the relationship between G.v. clades and biochemical and cellular phenotypes in human clinical samples and compare sialidase positive and negative G.v. clades and a G.v. sialidase mutant in our mouse vaginal colonization model.
In Aim 2, we will use our repository of live native vaginal communities in vitro to test how the availability of free sialic acid and exposed glycans, both consequences of sialidase activity, influence BV community composition and also examine the relationship between nanH2/H3-positive G.v. and bacterial burden and diversity in clinical specimens. Finally, Aim 3 we will evaluate samples from a longitudinal cohort of pregnant women to determine whether women who went on to experience preterm birth have higher levels of vaginal nanH2/H3-positive G.v., larger numbers of exfoliated epithelial cells, degraded mucus and epithelial glycans, and more diverse microbiomes with higher vaginal bacterial burden compared to term controls. The successful completion of these aims will have an important positive impact on this field by identifying G.v. subtypes that drive pathophysiology, defining mechanisms by which G.v. sialidase supports the development of dysbiosis and disease, and identifying biomarkers that might be used in clinical surveillance efforts to prevent preterm birth.

Public Health Relevance

Bacterial vaginosis is an imbalance of the vaginal flora that occurs in 1/3 of U.S. women and is associated with preterm birth and other reproductive complications. Successful completion of this project will result in a molecular understanding of the role played by specific subtypes of Gardnerella in the pathophysiology of BV and will help identify biomarkers that may be useful predictors of preterm birth.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
7R01AI114635-07
Application #
10305543
Study Section
Clinical Research and Field Studies of Infectious Diseases Study Section (CRFS)
Program Officer
Vincent, Leah Rebecca
Project Start
2014-12-01
Project End
2024-11-30
Budget Start
2020-12-01
Budget End
2021-11-30
Support Year
7
Fiscal Year
2021
Total Cost
Indirect Cost
Name
University of California, San Diego
Department
Obstetrics & Gynecology
Type
Schools of Medicine
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Amegashie, Courtney P; Gilbert, Nicole M; Peipert, Jeffrey F et al. (2017) Relationship between nugent score and vaginal epithelial exfoliation. PLoS One 12:e0177797
Robinson, Lloyd S; Lewis, Warren G; Lewis, Amanda L (2017) The sialate O-acetylesterase EstA from gut Bacteroidetes species enables sialidase-mediated cross-species foraging of 9-O-acetylated sialoglycans. J Biol Chem 292:11861-11872
Gilbert, Nicole M; O'Brien, Valerie P; Lewis, Amanda L (2017) Transient microbiota exposures activate dormant Escherichia coli infection in the bladder and drive severe outcomes of recurrent disease. PLoS Pathog 13:e1006238
Weimer, Cory M; Deitzler, Grace E; Robinson, Lloyd S et al. (2016) Genome Sequences of 12 Bacterial Isolates Obtained from the Urine of Pregnant Women. Genome Announc 4:
Robinson, Lloyd S; Perry, Justin; Lek, Sai et al. (2016) Genome Sequences of 15 Gardnerella vaginalis Strains Isolated from the Vaginas of Women with and without Bacterial Vaginosis. Genome Announc 4:
Yamaguchi, Masaya; Hirose, Yujiro; Nakata, Masanobu et al. (2016) Evolutionary inactivation of a sialidase in group B Streptococcus. Sci Rep 6:28852
Deitzler, Grace E; Ruiz, Maria J; Weimer, Cory et al. (2016) Genome Sequences of 14 Firmicutes Strains Isolated from the Human Vagina. Genome Announc 4:
Lewis, Amanda L; Robinson, Lloyd S; Agarwal, Kavita et al. (2016) Discovery and characterization of de novo sialic acid biosynthesis in the phylum Fusobacterium. Glycobiology 26:1107-1119
Kline, Kimberly A; Lewis, Amanda L (2016) Gram-Positive Uropathogens, Polymicrobial Urinary Tract Infection, and the Emerging Microbiota of the Urinary Tract. Microbiol Spectr 4:
Lewis, Amanda L; Lewis, Warren G (2016) A New Catalog of Microbiological Tools for Women's Infectious Disease Research. Genome Announc 4:

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